Pandoraea pnomenusa 3kgm: U875_13065
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Entry
U875_13065 CDS
T02936
Name
(GenBank) hypothetical protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppk03009
]
U875_13065
Enzymes [BR:
ppk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
U875_13065
Ribosome biogenesis [BR:
ppk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
U875_13065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AHB06190
LinkDB
All DBs
Position
2850969..2852738
Genome browser
AA seq
589 aa
AA seq
DB search
MSDTPRAKLSAKHPRTLDKTRAPVRSSGALRRPTKAVPASMLDAGGTKKAAAKPARPRPA
DDASAPAGARRPAGNAAVPRKSAANAANTTNAVKPYEKRATGDRPPQRGQRERVAGGRAV
RGAEGTPRRFDEDRPRRAGEGSAGGARGDYARPVKRGADDRAPRRFDEDRPRRADEGGAR
GGARGDYARPVKRGADDRAPRRFDEDRPRRADEGGARGGARGDYARPAKRGADDRAPRRF
DEDRPRRADEGGTRGGARGDYARPAKRGADDRAPRRFDEGGARGARGDYARPAKRGGEDA
PRGRFAREDHNARPARPARAARVERDDDDDIKVHHDAAGSLRLSKRMSELGLCSRREADE
WIAKGWVRVDGKVVTELGTKILPTQEITVVQAAHKEQANRVTILLHKPVGYVSGQAEDGY
EPAVVLVTREHHWAEDDAGVRFSPSHLRSLAPAGRLDIDSTGLLVLTQDGRIAKQLIGED
SEIEKEYLVRVSYNEHSQNVQAHFPADRLALLRHGLSLDDQPLKPAQVDWQNPEQLRFVL
KEGKKRQIRRMCDLVGLHVTGLKRVRMGRITLGNLPVGEWRYLRAGEGF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccccgcgcgccaaactgagcgccaaacacccccgcaccctcgacaagacg
cgcgcccccgtgcgttcgtcgggcgccttgcgtcgtccgaccaaggcggtgcccgcatcg
atgctcgacgctggcggcacgaagaaagccgctgcgaaaccggcgcgcccgcgcccggcg
gatgacgcgtcggcgccagcaggggcgcggcgccctgccggcaatgccgctgtcccgcgc
aaatccgcggccaacgcggccaatacgaccaatgcggtcaagccgtatgagaagcgcgca
acaggcgatcgtccgccccaacgcggccagcgcgagcgcgtggccggcggccgcgcggtc
cgtggcgccgagggtaccccgaggcgcttcgacgaggaccgcccgcgtcgcgccggcgaa
ggtagcgcgggtggcgcacggggcgattacgcccgcccggtcaaacgcggcgccgatgac
cgcgcgccgcgccgtttcgacgaagaccgtccgcgtcgcgccgacgaaggtggcgcgcgt
ggcggcgcacggggtgattacgcccgcccggtcaaacgcggcgccgatgaccgcgcgccg
cgccgtttcgacgaagaccgtccgcgtcgcgccgacgaaggtggcgcgcgtggcggcgca
cggggtgattacgcccgcccggccaaacgcggcgccgatgaccgcgcgccgcgccgtttc
gacgaagaccgtccgcgtcgcgccgacgaaggtggcacgcgtggcggcgcacggggtgat
tacgcccgcccggccaaacgcggcgccgatgaccgcgcgccgcgtcgtttcgacgaaggt
ggtgcacggggtgcacggggtgattacgcccgtccggccaaacgtggcggtgaagacgca
ccacgagggcgcttcgcccgcgaggaccacaatgcgcgtccggcacgcccggcacgcgcg
gcgcgtgtcgaacgcgacgacgatgacgacatcaaggtccatcacgacgcggcaggctca
ctgcgcctgtccaagcgcatgtcagagctgggcctgtgctcgcgacgtgaggcggatgag
tggattgccaaggggtgggtgcgcgtcgacggcaaggtcgtgacggaactcggcaccaag
attctgccgacgcaggaaatcacggttgtccaggccgcgcacaaggagcaggccaaccgc
gtcacgatcctgcttcacaagcccgtgggctatgtctccggacaagcggaagacgggtac
gaacccgccgtcgttctggtcacgcgagaacaccattgggccgaagacgatgccggcgtg
cgtttctcgccatcgcacctgcgtagcctggcgcccgccgggcgtctcgatatcgattcg
accggcctgctcgtcctgacgcaggacgggcgcatcgccaaacaactgatcggcgaagat
tccgagatcgagaaggagtatctcgtgcgcgtgtcctacaacgagcattcgcagaacgtt
caggcacacttcccggccgatcgcctggcgctgctgcgccatggactgtcgctcgacgac
cagccgctcaagccggcccaggtcgactggcagaatccggagcaactgcgattcgtgctc
aaggaaggcaagaagcgtcagatccgccggatgtgcgacctcgtcggcctgcacgtcacg
ggactcaagcgcgttcgcatgggacgtatcacgctcggcaatctgcccgtcggcgagtgg
cgctaccttcgcgccggcgagggattctga
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