Pandoraea pnomenusa 3kgm: U875_13410
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Entry
U875_13410 CDS
T02936
Name
(GenBank) transcriptional regulator
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_13410
Transcription factors [BR:
ppk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
U875_13410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AHB06255
LinkDB
All DBs
Position
complement(2929864..2930802)
Genome browser
AA seq
312 aa
AA seq
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MNFQQLRYVREAVRQNLNLTEAASALYTSQSGVSKQIKDLEDELGVDVFVRRGKRLTGLT
EPGKAVLQVIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPQVIKQFTSVYP
KVHLALRQGSPRQIAQMVIDGEADIGITTEALDRFPDIVTFPCYSWHHVAVVPKAHPLVG
RENVTLADIAEYPIITYDGDFTGRSHVDKAFAEQGLVPDIVLTALDTDVIKTYVELGLGV
GIVAAMAVDPRKDQDLSVLALDNAFEPSTTRIGLRRGAFLRSYAYRFIEMLAPALKEREI
STQLREALEFAA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcagcaattgcgttacgtgcgtgaagcggtgcgccagaacctcaacctgacg
gaagcggcaagcgcgctttacacgtcgcagtcgggggtgagcaagcagatcaaggacctg
gaggatgaactcggggtcgacgtgttcgtgcgacggggcaagcgcctcacggggctgacg
gagccgggcaaggcggtgctgcaggtgatcgagcgcatgctgctcgacgcggagaatctg
cgccgggtggcgcggcaattcgccgaccaggacagcggtcatctggtcgtcgcaaccacg
cacacgcaggcgcgttacgcgctgccgcaggtcatcaagcagttcacgagtgtgtacccg
aaggtgcacctcgcgctgcgccagggcagcccgcggcagatcgcgcagatggtcatcgac
ggcgaggccgacatcggcatcaccaccgaggcgctcgaccgctttcccgacatcgtcacg
ttcccgtgctactcgtggcatcacgtggcagtcgtgccgaaggcgcatccgctggttggc
cgcgagaatgtcacgctcgccgacattgccgaatatcccatcattacttatgacggcgac
ttcacggggcgctcacacgtggacaaggcgtttgccgagcaggggctggtgccggatatc
gtgctgaccgcgctcgatacggacgtgatcaagacgtacgtcgaactcgggctgggggtg
ggcatcgtggcggcaatggccgtcgatccccgcaaggaccaggatctgtcggtgctggcg
ctcgataacgccttcgagcccagcaccacgcgcattggcctgcgccgtggcgcgttcctg
cggtcctacgcctaccggttcatcgagatgctcgcacccgcgctcaaggagcgggaaatt
tcgacgcagctgcgcgaagcgctggaattcgccgcctga
DBGET
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