Pandoraea pnomenusa 3kgm: U875_15660
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Entry
U875_15660 CDS
T02936
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_15660
Enzymes [BR:
ppk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
U875_15660
DNA repair and recombination proteins [BR:
ppk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
U875_15660
Prokaryotic type
U875_15660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHB06613
LinkDB
All DBs
Position
complement(3383306..3384829)
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AA seq
507 aa
AA seq
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MHVSRRTDMSEFHKGLVWLRRDLRCADNASLAQALASCAEVYVAFVFDTTILDGLPRDDR
RVAFLHDSVCELDETLRARGGGLVVRHGDPAHEIPALAKTLGVQAVFAARDYEPAALRRD
RAVARSLGDQGIAFELVKDHVIFEMNEVLSAQGEPYSVFTPYQRAWLRQVRPVDLAPHGK
PSDFQRLAPPPRARNGAIPSLATLGFDVPESRRIAVPAGESGAQQLLDDFLPRMAHYHER
RDYPAVRGPSYLSVHLRFGTVSIRTLAREAHAAMQHGGEAGRGAQTWLGELIWRDFYFMI
LHHHPHVDGRAFKPAYDAIEWATGKAADAAFLAWCEGRTGYPLVDAAMRQINQTGYMHNR
LRMVTASFLVKDLGIDWRRGEAYFAQALNDFDLAANNGGWQWAASTGCDAQPYFRIFNPV
TQSEKFDPEGRFIRKYVPELADLPNKALHAPWRADAQTLSDAGVVLGRNYPEPLVAHDVA
RQETLTRYAVVKSPATSAEASGAPGAG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgtgtcgcgccgaactgacatgagcgaattccacaaaggtctggtatggctgcgg
cgcgatcttcgctgcgcggacaacgcttcgctggcgcaggcgctcgcgagttgcgccgag
gtctatgtcgcgttcgttttcgacacgaccattctcgacggactgccgcgcgacgatcgg
cgtgtcgctttccttcacgacagtgtttgcgaactcgacgaaacgctcagggcgcgcggt
ggcgggctggtcgtgcgccatggcgacccggcgcatgagattccggcactggcgaagacg
ctcggcgtgcaggcggtgttcgccgcccgggactacgagccggctgcgctcaggcgcgac
cgtgccgtcgcccggtcgctgggcgatcagggtatcgctttcgaactcgtgaaggaccac
gtgatcttcgagatgaacgaggttctgagcgctcagggcgagccctacagcgtattcacg
ccgtaccagcgtgcctggctcaggcaggtgaggccggtcgaccttgcaccgcacggcaag
ccgtccgatttccagcggttggccccaccgccgcgcgccaggaacggggcgataccgtcg
ttggcgacgctgggcttcgatgtgcccgagtcgcgccgcatcgcggtgcccgcgggggag
tcgggcgcgcagcagctgctcgacgacttcctgccacgcatggcgcactaccacgaacga
cgcgactatccggccgtgcgtggaccgagctatctgtccgtgcacctgcgcttcggcacc
gtgtcgatccgcacgctcgcgcgtgaggcgcacgctgccatgcagcacggcggggaggcc
ggccgcggcgcgcagacatggctcggcgagctgatctggcgcgacttctatttcatgatc
ctgcatcatcacccgcacgtggacggccgggcgttcaagccggcgtacgacgcgatcgag
tgggcgacgggcaaggcggcggacgctgcgttcctggcctggtgcgaggggcgcaccggg
tatccgctcgtcgacgcggcgatgcgtcagatcaatcagaccggttatatgcacaaccgc
ctgcgaatggtgacggcaagctttctggtcaaggatctgggcatcgactggcggcgcggg
gaggcgtacttcgcgcaggccctcaacgatttcgatctggcggcgaacaatggcgggtgg
cagtgggccgcctcgaccggttgcgatgcccagccgtactttcgcatcttcaacccggtc
acgcagtcggagaagttcgaccccgaagggcgattcatccgaaagtacgtgcccgaactg
gctgatctgcccaacaaggcgctgcatgcgccctggcgcgccgatgcgcagaccttgagc
gacgccggcgtggtgttggggcgaaactatccggagccgctggtcgcgcacgatgtggcg
cgtcaggagacgctgacgcggtatgcagtcgtgaaatcgccggcgacatcggccgaggcg
agtggcgcgcctggtgccgggtga
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