Pandoraea pnomenusa 3kgm: U875_16760
Help
Entry
U875_16760 CDS
T02936
Name
(GenBank) AMP-binding protein
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00010
Glycolysis / Gluconeogenesis
ppk00620
Pyruvate metabolism
ppk00630
Glyoxylate and dicarboxylate metabolism
ppk00640
Propanoate metabolism
ppk00680
Methane metabolism
ppk00720
Other carbon fixation pathways
ppk01100
Metabolic pathways
ppk01110
Biosynthesis of secondary metabolites
ppk01120
Microbial metabolism in diverse environments
ppk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
U875_16760
00620 Pyruvate metabolism
U875_16760
00630 Glyoxylate and dicarboxylate metabolism
U875_16760
00640 Propanoate metabolism
U875_16760
09102 Energy metabolism
00720 Other carbon fixation pathways
U875_16760
00680 Methane metabolism
U875_16760
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppk01004
]
U875_16760
Enzymes [BR:
ppk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
U875_16760
Lipid biosynthesis proteins [BR:
ppk01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
U875_16760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
FlgO
Motif
Other DBs
NCBI-ProteinID:
AHB06807
LinkDB
All DBs
Position
3618300..3619958
Genome browser
AA seq
552 aa
AA seq
DB search
MSDYADTYRTFDLDATVRAVLHGNLEAMNACVECCDRHALPGRIALFWEGRDGTSQTWTF
RQLQTLSARFANFLREQGVQPGDRVSGLLPRTPELLVTILGTWRAGAVYQPLFTAFGPKA
IEHRLSSAQSKLVVTDGANRAKLEEVANCPPVATVGGPRGQGVRRGDFSFWHEIEQHGAD
FEPVMRRGDDPFLMMFTSGTTGAAKPVMVPLRAIIAFAGYMRDAVDLRPTDTFWNIADPG
WAYGLYYAVTGPLALGIPTTFYDGPFTVESTYRIIQKLGVTNLAGSPTAYRLLIAGGDTA
AAPLKGQLRAVSSAGEPLNPEVIRWFAQHLGVTIHDHYGQTELGMVVCNHHALSHPVQAG
AAGFASPGHRVVVLDDEGRECPIGQPGVLALDRKQSPLMWFGGYWERETPAFVGDYYLSG
DTVERNEDGSISFVGRNDDVITSAGYRIGPFDVESALIEHPAVVETAVVGKPDPERTELV
KAFVVLHPQFAPTDTLARELQEHVRHRLSTHAYPREVEFVTELPKTPSGKLQRFILRNQE
IAKAAQASAGAH
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atttcggattatgccgacacgtaccggacgttcgacctcgatgccacggtgcgcgccgtg
ctgcacggcaatctcgaggcgatgaacgcctgcgtcgagtgctgcgaccgccacgcgctg
cccgggcgcatcgcccttttctgggaaggcagggacggcacgagccagacctggacgttc
cggcaattgcaaacgctctccgcacgcttcgccaacttcctgcgcgaacagggcgtgcag
ccgggcgaccgcgtgagcggcctgctcccgcgcacgccggagctgctcgtgacgattctc
ggcacctggcgcgcgggggcggtgtatcagccgttgttcacggcattcggccccaaggcc
atcgaacatcggctgagcagcgcgcaaagcaagctcgtcgtcactgacggcgccaaccgc
gccaagctcgaagaagtggccaactgcccgccggtggcaacggtcggcggcccccgcggc
cagggcgtgcgacgcggcgacttcagcttctggcacgagatcgagcagcacggcgccgac
ttcgaacccgtcatgcgccgcggcgacgaccctttcctgatgatgttcacttcgggcacc
acgggcgcggccaaaccggtcatggtgccgctgcgcgccatcatcgcattcgccggctac
atgcgcgacgccgtcgacctgcgaccgaccgacacgttctggaacattgccgatccgggg
tgggcctacgggctctactacgccgtgacggggccgctggcgctgggcatccccaccacc
ttctacgacgggccgttcacggtcgagagcacctaccggatcattcagaagctgggcgtc
accaaccttgccggttcgccgaccgcgtatcgtctgctgatcgccggcggtgacaccgcc
gccgccccgctcaaggggcagttgcgcgcggtgtcgagcgccggcgagccgctcaacccc
gaggtcattcgctggttcgcgcagcacctcggcgtcacgattcacgaccactatggacag
accgaactgggcatggtcgtgtgcaaccatcatgcgctgtcgcatcccgtgcaggcaggc
gccgccggcttcgcctcgcctggccatcgcgtggtcgtgctcgacgacgagggccgcgaa
tgcccgattggccagcccggcgtgctcgcgctcgaccgaaagcagtcgccgctcatgtgg
ttcggtggctactgggagcgggaaacaccggcattcgttggtgactactatctctccggc
gacaccgtcgagcgcaatgaagacggcagcatcagcttcgtcgggcgcaacgacgacgtg
atcacgtcggcgggctatcgcatcggcccgttcgatgtcgagagcgccctgatcgagcac
cccgcggtggtcgagactgccgtggtcggcaaaccggaccccgagcgcaccgagctggtc
aaggccttcgtggtgctgcacccgcaattcgcgccaacggacaccctcgcgcgcgagctg
caggagcacgtccgacaccgtctgtccacgcacgcctatccgcgtgaagtcgaattcgtc
accgagttgcccaaaacgccgagcggcaaactccagcgattcatcctgcgcaatcaggaa
attgccaaggccgcgcaggcgtcggccggcgctcactga
DBGET
integrated database retrieval system