Pandoraea pnomenusa 3kgm: U875_17420
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Entry
U875_17420 CDS
T02936
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U875_17420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_17420
Transporters [BR:
ppk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
U875_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_16
AAA
SMC_N
AAA_29
AAA_30
AAA_22
nSTAND3
RsgA_GTPase
AAA_25
Zeta_toxin
nSTAND1
nSTAND_NTPase5
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHB06924
LinkDB
All DBs
Position
complement(3775650..3776762)
Genome browser
AA seq
370 aa
AA seq
DB search
MTIANLQVSGLSKRYGDFVALAPTDLDVAQGEFLTLLGPSGSGKTTLLSLIAGLSQPDAG
AIRINGTDVTYGAPYERDIGMVFQNYALFPHMTVAENIAFPLQMRRTDAQAARKRVMDAL
EMVHLPHVAERYPRELSGGQQQRIALARCMVYRPSIILMDEPLGALDKKLRDHMQLEIKR
IHRELGTTIVYVTHDQEEAMTMSDRICLMNAGEIAQLGTPDDLYFRPKSVFVADFLGESN
LLDATVLERAGDQVRVAMPGVQGSLGAGAMVYDPQVERGRPVKLMLRPQNLHIHDGQPAA
DGMATISARLTDIMVTGGMTKLYLQSALTDGDAGKSLVAAFPTHRQGNRFEIGQTLGLAW
RADDAVAIAG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgccaatctccaggtgtcgggcctgtccaagcgctacggcgatttcgtcgcg
ctcgcaccgaccgacctcgatgtcgcccagggcgaattcctgaccttgctcgggcccagc
ggctcgggcaagaccaccttgctctcgctcatcgcgggtctgtcgcagcccgacgccggg
gccatccgcatcaacgggaccgatgtcacgtatggcgcgccgtacgaacgcgacatcggc
atggtgttccagaactacgcgctgtttccgcacatgaccgtggcggagaacatcgccttc
ccgttgcagatgcgtcgcaccgacgcacaggccgcgcgcaagagggtcatggacgcgctg
gaaatggtgcatctgccgcacgtggcggagcgctatccgcgcgagctctcgggtgggcag
caacaacgtatcgcgctcgcgcgatgcatggtgtaccggccgtccatcatcctgatggac
gagccgctcggtgcgctcgacaagaagctgcgcgatcacatgcagctcgagatcaagcgc
attcaccgcgagctcggcaccaccatcgtgtatgtcacgcacgatcaggaagaggcgatg
acgatgtcggaccgcatttgcctgatgaacgcgggcgaaattgcccaactcggcacgccg
gacgatctgtacttccgtccgaagagcgtgttcgtggccgacttcctcggcgagtccaac
ctgctcgacgccaccgtgctcgagcgcgcgggcgatcaggtgcgcgtggccatgcccggc
gtgcagggctcgctcggcgccggcgccatggtctacgacccgcaggtcgagcgcggccgt
ccggtcaagctgatgctgcgtccgcagaacctgcacatccacgacgggcagcctgcggcc
gacggcatggccacgatctcggccaggctcaccgacatcatggtcactggcggcatgacc
aagctctacctgcaatcggcgctcaccgacggcgacgccggcaagtcgctggtggcggcg
tttcccacgcatcgtcagggcaaccgcttcgagatcggccagacgctcggtctcgcgtgg
cgtgccgacgacgccgtggcgatcgcggggtaa
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integrated database retrieval system
