Pandoraea pnomenusa 3kgm: U875_17495
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Entry
U875_17495 CDS
T02936
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00330
Arginine and proline metabolism
ppk01100
Metabolic pathways
ppk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
U875_17495
Enzymes [BR:
ppk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
U875_17495
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHB06936
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All DBs
Position
complement(3798610..3800895)
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AA seq
761 aa
AA seq
DB search
MKFRFPIVIIDEDFRSENISGSGIRSLAEAIEAEGMEVNGLTSYGDLTSFAQQASRASSF
ILSIDDDEFGTFSSEAGGEGEGELALAIINLRAFVQEVRRRNPDIPIFLYGETRTSRHIP
NDILRELHGFIHMFEDTPEFVARHIIREARSYLDSLPPPFFRSLTHYAADGSYSWHCPGH
SGGVAFLKSPVGQMFHQFFGENMLRADVCNAVEELGQLLDHNGPVGASERNAARIFNADH
LFFVTNGTSTSNKIVWHATVAPGDIVVVDRNCHKSILHAITMTGAVPVFLTPTRNHLGII
GPIPKSEFEPEVIRAKIEANPFAREVLERDPNAKPRILTITQSTYDGVIYNVEMIKELLG
NNIDTLHFDEAWLPHAAFHEFYRDMHAIGEGRPRSSEATVYATHSTHKLLAGISQASQIV
VQDSEARTFDTYRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIVEALDF
RRAMRKVASEYGDSWWFSVWGPENLGDEGTIQRDDWVLRANDRWHGFGDLADGFNMLDPI
KATIITPGLDVDGEFGESGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSM
VTELQQFKDDYDHNRPLWRVLPEFVAQFPRYERIGLRDLCDQIHSVYKANDVARVTTEMY
LSDMQPAMKPTDAFSKLAHRQIDRVPIDELEGRVTSVLLTPYPPGIPLLIPGERFNAAII
EYLRFARDFNERFPGFHTDIHGLVVEEVDGRPEYFVDCVRQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgttttccgatcgtcatcatcgacgaggacttccgctccgagaacatttcc
ggatccgggattcgctccttggcggaggccatcgaagccgagggcatggaagtcaacggc
ctcacgagctacggcgacctgacctcgttcgcgcagcaggcaagccgcgcctcgagcttc
atcctgtccatcgacgacgacgagttcggcacattctcgagtgaagcgggcggcgaaggc
gagggcgaactggcgctggccatcatcaacctgcgtgccttcgtgcaggaagtgcgccgc
cgcaacccggatattccgattttcctgtacggcgagacgcgtacctcgcgccacattccg
aacgacatcctgcgtgagctgcacggcttcattcacatgttcgaagacacgccggagttc
gtggcgcgtcacatcatccgtgaagccaggtcgtacctcgactcgctgccgccgccgttc
ttccgctcgctcacgcattacgccgccgacggttcgtactcgtggcactgcccggggcac
tcgggcggcgtggcgttcctgaagagcccggtgggccagatgttccaccagttctttggc
gagaacatgctccgcgcggacgtctgcaacgccgtggaagaactcggccaactgctcgat
cacaacggcccggtgggcgcgtcggagcgcaatgcggcgcgaatcttcaatgccgaccat
ctgttcttcgtcacgaacggtacgtcgacctccaacaagatcgtgtggcatgccacggtg
gcgcccggcgacatcgtcgtcgtcgaccgcaactgccacaagtcgatcctgcacgcgatc
accatgacgggggccgtgccggtgttcctcacgcccacgcgcaaccacctcggcatcatc
ggaccgattccgaagtcggagttcgagccggaagtcattcgcgcaaagatcgaggcgaac
ccgttcgcgcgcgaagtgctggagcgcgatccgaacgccaagccgcgtattttgacgatc
acgcagagcacgtatgacggcgtgatctacaacgtcgaaatgatcaaggaactgctcggc
aacaacatcgacacgctgcatttcgacgaggcctggttgccgcacgcggcgtttcacgag
ttctatcgcgacatgcatgcgatcggcgaaggccgcccgcgctcgtcggaagcgaccgtc
tatgccacgcactcgacgcacaagctgctcgccggcatttcgcaggcttcgcagatcgtg
gtgcaggactcggaggcccgcacgttcgatacgtatcgcttcaacgaggcatacctgatg
catacgtcgacctcgccgcaatacgcgatcatcgcgtcgtgcgacgtggccgcggccatg
atggagccgccgggcggcacggcgctggtcgaggaatcgatcgtcgaggcgctcgacttc
cgccgcgccatgcgcaaggtcgcctcggagtatggcgactcgtggtggttctcggtctgg
gggccggagaacctgggcgacgaggggacgatccagcgcgacgactgggtgctgcgcgcg
aacgaccgctggcacggcttcggcgatctggccgacggtttcaacatgctcgacccgatc
aaggcgacgatcatcacgccggggctggacgtggacggcgagttcggcgagagcggcatt
ccggcggccatcgtcaccaagtacctggccgagcacgggatcatcgtcgagaagaccggc
ttgtattcgttcttcatcatgttcaccatcggcattacgaagggccgctggaactcgatg
gtgaccgaactccagcagttcaaggacgactatgatcacaaccgtccgctgtggcgggtg
ctgccggagttcgtggcgcagttcccgcgttacgagcgtatcggcctgcgcgatctgtgc
gatcagatccatagcgtgtacaaggccaacgacgtggcccgcgtgaccaccgagatgtac
ctctcggacatgcagccggcaatgaagccgaccgacgcgttctcgaagctggcgcatcgc
cagatcgaccgggtgccgatcgacgaactcgaagggcgtgtgacgagcgtgctgctcacg
ccctatccgccggggattccgctgctgattccgggcgagcgcttcaacgccgccatcatc
gaatatctgcgattcgcgcgcgacttcaacgagcgtttcccggggttccataccgacatc
cacgggctcgtcgtggaggaggtggacggacgccccgagtacttcgtggattgcgtgcgc
cagtaa
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