Pandoraea pnomenusa 3kgm: U875_17770
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Entry
U875_17770 CDS
T02936
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppk03032
]
U875_17770
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_17770
Enzymes [BR:
ppk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
U875_17770
DNA replication proteins [BR:
ppk03032
]
Prokaryotic type
DNA Topoisomerases
U875_17770
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U875_17770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHB06986
LinkDB
All DBs
Position
complement(3859721..3862342)
Genome browser
AA seq
873 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDASVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKIGHELLADIDKETVDFGPNYDGSEKEPLILPARIPNLLLNGSSGIAVGMAT
NIPPHNLNEVVEGCLHLLKHPDATVDELIEIIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRVAIIVDELPYQVNKRSLLERIAELVNEKRLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKHTQLQDTFGMNMVALVDGQPKLLNLREMLVHFLAHRRE
VITRRTVYELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKSALMEKSWDSSVV
REMLARAESETQGGRAAYRPEGLDADVGMQADGLYRLSETQAQEILQMRLQRLTGLEQDK
IVSEYKEVMAQIADLLDILARPIRVTTIISEELTSVRAEFGDARRSTIEHNATELDTEDL
ITPQDMVVTLSHSGYIKSMPLSEYRAQKRGGRGKQAAATKDDDWIDTLFIANTHDTILCF
SNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPVKEYTEDRFVFMATSLG
TVKKTPLAAFSRPLKKGIIAVNLDDGDVLIGAAITDGAHDVMLFSDAGKAVRFDENDVRP
MGREARGVRGMQLEEGQNVIALLVAENEQQSVLTATVNGYGKRTSITEYTRHGRGTKGMI
AIQTSERNGRVVAATLVEPDDEIMLITTGGVLIRTRVSEIREMGRATQGVTLISLDEGTT
LSGLQRIVESDAEVAENGDAHGDDETPEADVTE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttcgccaaagaaactctcccgatttcgctcgaagaagaaatgcggcggtcg
tacctcgattacgccatgagcgtgatcgtcggccgcgccttgccggacgtgcgcgacggc
ctcaagcccgtgcaccgccgcgcgctgttcgccatgcatgagttgaacaacgactggaac
cgggcgtacaagaaatcggcgcgtatcgtcggtgacgtcatcggtaagtaccacccgcac
ggcgacgcttccgtatacgacaccatcgtgcggatggctcagccattctcgctgcgttac
atgctcgtcgacggccagggcaacttcggttcggtcgacggcgacaacgccgccgccatg
cgctacaccgaagtgcgcatggccaagatcggtcatgagttgctcgcggacatcgacaag
gaaacggtcgacttcggtccgaactacgacggcagcgagaaggagcccctgatcctgccc
gcccgcatcccgaacctgctgctcaacggctcgtcggggatcgcggtgggcatggccacc
aacattccgccgcacaacctcaacgaagtggtcgaggggtgcctgcatctgttgaagcat
ccggatgccaccgtcgacgaactgatcgagatcattccggcgccggacttcccgacggcc
ggcatcatctacggcatttccggggtgcgtgaaggctaccgcaccggtcgtggccgtgtg
gtgatgcgagcgaagactcacttcgaggatatcgatcgcggtcagcgcgtggcgatcatc
gtcgacgagctgccgtatcaggtgaacaagcgctcactgctcgagcgtattgcggaactg
gtcaacgagaagcgtctcgagggcatctccgacattcgcgacgagtccgacaagagcggc
atgcgcgtggtgatcgagctcaagcgcggcgaagtgcccgaggtggtgctgaacaatctc
tacaagcacacgcaactgcaggacacgttcggcatgaacatggtggcgctggtcgacggc
cagcccaagctgctgaacctgcgcgagatgctggtgcacttccttgcgcaccgccgcgaa
gtgattactcgccgcaccgtatacgaactgcgtcgcgcgcgtgagcgcggccatgtgctc
gaggggctggcggtcgcgctcgcgaacatcgacgacttcatcgcgatcatcaaggccgcg
cctacgccgccgatcgcgaagtccgcgctgatggaaaagtcttgggattcgtcggtggtg
cgcgaaatgcttgcgcgcgccgaaagcgaaacccagggcggtcgtgccgcttatcgcccc
gaggggctcgacgccgacgtcggcatgcaggccgatggcctgtatcggctgtcggagacg
caggcgcaggaaattctccaaatgcgtctgcagcgcctgaccggcctcgagcaggacaag
atcgtctccgagtacaaggaagtgatggcccagatcgccgacctgctcgacatcctggcg
cgtcccatccgcgtgacgacgatcatcagcgaagagctgacctcggtgcgcgccgagttc
ggcgacgcccgtcgctcgaccatcgagcacaacgcgaccgaactggatacggaagacctc
atcacgccgcaggacatggtcgtgacgctgtcgcactccggttacatcaagtcgatgccg
ctgtccgagtaccgggcgcagaagcgcggcggtcgcggcaagcaggcggccgccacgaag
gacgacgactggatcgacacgctgttcatcgccaacacgcacgacacgatcctgtgcttc
tcgaaccgcggccgcgtgtactggatcaaggtatacgaagtgccgcagggttcgcggaac
tcgcgtggccgtccgatcgtcaatatgttcccgttgcaggaaggcgagaagatcaacgtg
gtgctgccggtcaaggagtacaccgaagatcgcttcgtgttcatggcaacgagcttgggc
acggtcaagaagacgccgctggcggccttcagccgtccgctcaagaagggcatcatcgct
gtgaatctcgatgacggcgacgtgctgatcggcgcggccatcaccgatggcgctcacgac
gtgatgctgttctccgacgccggcaaggcggttcgcttcgacgagaacgatgtgcgtccg
atggggcgcgaggcgcgcggcgttcgcggtatgcaactggaagaaggccagaacgtcatc
gcgctgctggtcgccgagaacgagcagcagtcggtgctcacggcgaccgtgaacggttac
ggcaagcgcacgtcgatcacggaatatacccgccacggccgtggcactaagggtatgatt
gcgatccagacgagcgagcgtaacggccgggtggtcgcggcgacgctggtcgagccggat
gacgagatcatgctgatcacgacgggcggcgtgctgatccgtacgcgtgtgtcggaaatt
cgcgaaatgggccgcgcgacgcagggggtgacgctgatcagcctggacgaaggcacgacg
ctgtcgggcttgcagcggatcgtcgagtccgacgccgaagtggccgaaaatggcgacgcg
cacggcgacgacgagacgcccgaggcggatgtcacggagtaa
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