Pandoraea pnomenusa 3kgm: U875_18570
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Entry
U875_18570 CDS
T02936
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00362
Benzoate degradation
ppk00624
Polycyclic aromatic hydrocarbon degradation
ppk01100
Metabolic pathways
ppk01120
Microbial metabolism in diverse environments
ppk01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
U875_18570
00624 Polycyclic aromatic hydrocarbon degradation
U875_18570
Enzymes [BR:
ppk01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
U875_18570
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AHB07132
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Position
complement(4044273..4044983)
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AA seq
236 aa
AA seq
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MSNTTTVLRPRDWDSHPRLIDSGYKSTALRGPKQLLIPVKQNLADLRSPVYGNGIIGALD
GDLTRNAVRNGEPLGERMIVTGRVLDEGGRPVPNTLVELWQANACGRYVHKVDQHDAPLD
PNFLGAGRALTDAQGRYRFLTIKPGAYPWKNHHNAWRPQHLHFSVFGHYFATRLVTQMYF
PGDPLLAYDPIFQATPAHARDRLIARFSMDITEPEYALGYEFDIVLRGADQTPMES
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacgacaaccgtcctgcgcccgcgcgactgggattcgcatcccaggctcatc
gacagcggatacaagtccacggcgctgcgcggtcccaagcagttgctcatccccgtcaag
cagaacctcgccgatctgcgctcgccggtctacggcaacggcatcatcggtgcgctcgac
ggtgatctcacgcgtaatgcggtgcgcaacggcgagcccctcggcgagcggatgatcgtc
acgggccgcgtgctcgacgagggcggccgtccggtcccgaacacgctcgtggagctgtgg
caggccaacgcctgcggccgctacgtgcacaaggtggaccagcacgacgcaccgctcgac
ccgaacttcctcggcgccggccgtgcgctgaccgatgcgcagggccgctacaggttcctg
accatcaagccgggcgcctatccgtggaagaaccaccacaatgcatggcgtccgcagcat
cttcacttttcggtgttcggccattacttcgcgacccgtctggtgacgcagatgtatttc
ccgggcgacccgctgctggcctacgatccgatcttccaggccacgccggcgcacgcccgg
gaccgtttgatcgcgcgcttctcgatggatatcacggagcccgagtacgcgctgggttat
gaattcgacatcgtgctgcgcggtgccgaccaaacgccgatggagtcctga
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