Pandoraea pnomenusa 3kgm: U875_19495
Help
Entry
U875_19495 CDS
T02936
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_19495
Transcription factors [BR:
ppk03000
]
Prokaryotic type
Helix-turn-helix
Other families
U875_19495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_3
TetR_N
HTH_24
HTH_31
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AHB07251
LinkDB
All DBs
Position
4243465..4244334
Genome browser
AA seq
289 aa
AA seq
DB search
MLNRIEATLTQLRPSERKLATYVLDAPREVVDLSMNELAERANVSQPTIARFCQAVGCSG
YREFKIRLAQGIAQGVPFVHRDVRPDEPVPGIAGKVLDRTIGSLMQVRNNLSPDSIGQAI
DLLARARRIEFYGAGASGIAAQDMQHKFFRLGVPSVAYNDPHVYGMSAALLGEGDVVVAI
SNTGRTQDLLEAVGLARAAGASVIAITHSNSPLARQASVALFADVDEDTDVYSPLTSRIS
HLAIGDVLAVGMALRLGDRLPSQLARAKEVINRRRTGIDGKPSTARGGT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaccgaattgaagccacgctgacccagttgcgtccgtccgagcgcaagctcgcg
acctacgtgctcgacgcgccgcgcgaagtcgtcgacctgtcgatgaacgaactcgccgag
cgcgccaacgtgagccagccgacgatcgcgcgcttttgccaggcggtcggttgcagcggg
taccgggaattcaagatccgcctggcgcagggcatcgcccagggcgtgcctttcgtgcac
cgcgacgtgcggcccgacgagccggtgcccggcattgccggcaaggtgctcgatcgcacc
atcggcagcctgatgcaggtgcgcaacaatctctcgcccgacagcatcgggcaagccatc
gatctgctcgcccgcgcgcgccgcatcgagttctacggcgcgggtgcgtcgggcatcgcc
gcgcaggacatgcagcacaagttcttccgtctcggcgtgccctcggtggcctacaacgac
ccgcacgtctacggcatgtccgccgcgctgctcggcgaaggcgatgtggtcgtggcgatc
tccaacacggggcgcacgcaggatctgctcgaagccgtcgggctcgcgcgcgcggccggc
gccagcgtgatcgcgatcacgcacagcaattcgccgcttgcgcgtcaggcgagcgtggcg
ctgttcgcggacgtcgatgaagacacggacgtgtattcgccgctcacgtcgcgcatctcg
catctggccatcggcgatgtgctggcggtgggcatggcattgcgcctgggcgaccgcctg
ccgtcgcaactcgcgcgcgcgaaggaagtgatcaaccggcgtcgcaccgggatcgacggc
aagccatccacggcgcgcggcggcacctga
DBGET
integrated database retrieval system
