Pandoraea pnomenusa 3kgm: U875_20440
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Entry
U875_20440 CDS
T02936
Name
(GenBank) ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U875_20440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_20440
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U875_20440
RecFOR pathway proteins
U875_20440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
HHH_8
IMS_HHH
5_3_exonuc
DUF3693
Motif
Other DBs
NCBI-ProteinID:
AHB07424
LinkDB
All DBs
Position
complement(4454878..4455459)
Genome browser
AA seq
193 aa
AA seq
DB search
MIGRISGTLLEKNPPHILVDCQGVGYEISVPMSTFFNLPNVGERVTLLTQFIVREDAQLL
FGFGSPDERNTFRELLKISGVGARTALAILSGMSVADIAQAVTLQESGRLTKIPGIGKKT
AERLLLELKGKLGAQLGTVAGVATPHDHKSDVVNALLALGYSDKEALAAVKSVPEGTGVS
EGIKHALKSLSKA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgattggccgcatctccggcacgctgctggaaaagaatccgccgcacatcctggtcgat
tgccagggcgtgggctacgaaatatcggtgccgatgagcaccttcttcaatttgccgaac
gttggcgagcgcgtcacgctgctcacccagttcatcgtgcgcgaggacgcccaactgctg
ttcggcttcggctcgcccgacgagcgcaacacgtttcgcgagctgctcaagatctcgggc
gtcggcgcgcgcaccgcgctggcgatcctctcgggcatgagcgttgcggacatcgcacag
gccgtgacgctgcaggaatcggggcgtttgaccaagatccccggcatcggcaagaaaacg
gccgaacggctgcttctcgaactcaagggaaagctcggggcgcagttgggcaccgtggcc
ggcgtcgcaacgccgcacgatcacaagagcgatgtcgtcaacgcgttgctcgcactgggc
tattccgacaaggaagcgcttgccgccgtcaagtccgtgcctgaaggcacgggcgtgtcg
gagggcatcaagcacgcactcaagtcgctctccaaggcatga
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