Pandoraea pnomenusa 3kgm: U875_20865
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Entry
U875_20865 CDS
T02936
Name
(GenBank) AraC family transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_20865
Transcription factors [BR:
ppk03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
U875_20865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_IclR
MarR_2
HTH_5
HTH_20
HTH_9
HTH_Crp_2
HTH_PafC
MarR
HTH_29
HTH_7
DUF977
RA
TrmB
TFIIE_alpha
HTH_36
PaaX
HTH_24
HTH_28
Put_DNA-bind_N
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AHB07505
LinkDB
All DBs
Position
complement(4550690..4551445)
Genome browser
AA seq
251 aa
AA seq
DB search
MLAEQRQQYVLEQLARTGALAISDLVRELGVSRETVRRDLNTLAARGLLLMTHGGALAAD
RSEPDWTLRENVNAVGKRAIGVRAAELVPDGASVIIDYGTTTRAVAQALLSKHRLRVYTN
DWQIARLLGRHHDNRVTLLGGELQDNEDAVQGWDAINQIAQYHADFAFIGVGGVTEDGGI
TDFNRAAAELRARMLLCANVAAVVADHTKFGRVTPVRIRHFEAARYLISDAAPHKSMLAQ
LRARGPELLIA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgaacaacgccaacaatacgtgctcgaacaacttgccaggaccggagcgctc
gcgatcagcgacctcgtgcgcgagttgggtgtctcgcgagagaccgtgcggcgcgacctc
aatacgctggccgcccgcgggctgttgctcatgacgcacggtggcgcgctggccgccgat
cgcagcgagccggactggacattgcgcgagaacgtcaatgcggtgggcaagcgggccatc
ggcgtgcgtgcggcggaactggtgcccgacggcgcctcggtcatcatcgattacggcacg
accacgcgcgcggtggcgcaggcgctgctctccaagcatcggctgcgcgtctacacgaac
gactggcagatcgcccggctcctcgggcgtcaccatgacaaccgcgtgacgctgctcggc
ggcgagctgcaggacaatgaagacgccgtgcagggctgggacgccatcaaccagatcgcg
cagtatcacgccgatttcgccttcatcggggtaggcggcgtgaccgaagatggcggcatc
accgacttcaatcgtgcggcggccgaattgcgtgcgcgcatgttgctatgtgcgaacgtc
gccgccgtggtggcggatcacacgaagttcgggcgcgtcacgccggtacggattcgccac
ttcgaggccgcgcgctatctcatcagcgacgccgcgcctcacaagagcatgctcgcgcaa
ttgcgcgcccgcggcccggagctgctgatcgcctga
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