Pandoraea pnomenusa 3kgm: U875_20940
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Entry
U875_20940 CDS
T02936
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U875_20940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_20940
Enzymes [BR:
ppk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
U875_20940
DNA repair and recombination proteins [BR:
ppk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U875_20940
Prokaryotic type
U875_20940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AHB07520
LinkDB
All DBs
Position
complement(4564193..4565362)
Genome browser
AA seq
389 aa
AA seq
DB search
MTESPENAGTDALAATFAERLIAWQAEHGRHDLPWQNTRDAYRIWLSEIMLQQTQVATVI
PYYTKFLERFPDVTALANAPQDDVMALWSGLGYYSRARNLHRCAQVVVAEHGARFPSDPQ
VLAALPGIGRSTAAAIAAFAYDAHAAILDGNVKRVLARVFGIEGFPGTPKIEREMWALAE
SLLPQRDLPAYTQGMMDLGATLCGRGKPRCGECPFDGDCVAHATGRERTLPTAKPKKAQP
QRYVDVLVIRAADRVLFERRPDSGIWGGLWSLPELTPPTDACAPDDAALRARLTALAVTL
AQGAENGLGAQEVAPSIVPLQGLTHVFTHFKLFLRPWLVTLPSASAAGSRHAWLDAPGMA
AAGLPSPIRKIADALSLTVQDDGQLRLPA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcccccgaaaacgcaggcaccgacgcgctggcggccacgtttgccgagcgc
ctgatcgcgtggcaggccgagcacgggcgtcacgacctgccgtggcagaacacccgcgac
gcctatcgcatctggctctcggagatcatgctccagcagacgcaggtcgccaccgtcatt
ccgtattacacgaaatttcttgaacgctttcccgacgtgacggcattggccaatgcgccg
caggacgacgtcatggcgctgtggagcgggcttggctactactcgcgggcgcgcaatctg
catcgttgcgcccaggtcgtggtggccgagcacggggcccgcttcccgtccgatccgcag
gtcctcgccgcgttgccgggcattggtcgttcgacggccgccgccatcgcggcgtttgcg
tatgacgcgcacgcggccattctcgacggcaacgtcaaacgcgtgctcgcaagagtgttt
ggcatcgaaggatttcccggcacgccgaagatcgagcgcgagatgtgggcgctggccgag
tcgctgctgccccaacgggatctgccggcctatacgcaggggatgatggatctcggtgcg
acgctttgcgggcggggcaagccgcgttgcggagagtgtccgttcgacggcgattgcgtg
gcgcacgccacgggccgcgagcgcacgttgccgacggccaagccgaagaaggcgcagccg
cagcgctatgtcgatgtgctcgtcattcgtgcggccgaccgcgtgctgttcgagcggcgt
ccggacagcggcatctggggcggactgtggagtctgccggaactcacgccgccgacggat
gcctgcgcgccggacgatgccgccttgcgcgcgcgcctgacggcgcttgccgtgacactt
gcccagggcgcggagaacggcctgggcgcgcaggaagtggcgccgtcgatcgtgccgctg
caggggctgacgcacgttttcacgcacttcaagctattcctgcggccgtggctcgtgacg
ctgccatcagcgtcggcagccggttcgcgtcacgcgtggctcgacgcgccgggcatggcc
gccgccggcttgccgtcgccgattcgcaagatcgccgacgcgctctcgctcaccgtgcag
gacgacggccaactacggttgcctgcgtga
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