Pandoraea pnomenusa 3kgm: U875_21050
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Entry
U875_21050 CDS
T02936
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppk03021
]
U875_21050
Transcription machinery [BR:
ppk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U875_21050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AHB07539
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All DBs
Position
4584490..4585428
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AA seq
312 aa
AA seq
DB search
MSTAATLHPTTPATGTAPTSRALALAPSALMLPGSLGNIDSYIQAVNRIPLLSAEEEQSL
AKRLRENDDLEAARQLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPAQ
GVRLVSYAMHWIKAEIHEYVLKNWRTVKVATTKAQRKLFFNLRSQKQGLQAFTPEEIDQV
ARDLNVKREDVIEMETRMSGGDIALEGHSDDGESASFAPIAYLADSHQEPTAVIAARERD
HLQSDGLQTALGRLDPRSRRIIEARWLSVADDGSGGATLHELAEEFGVSAERIRQIEVAA
MKKMKGALQAYA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagtactgccgccactttgcatccgacgacgccggccaccggcacggcgccgacttcg
cgtgcccttgcgcttgccccgtccgcgttgatgctgccgggcagtctgggcaatatcgac
agctacattcaggctgtcaaccgcattcccctgctttccgccgaggaagagcagtcgctc
gccaagcgtctgcgcgagaacgatgatctggaagccgcccgccagttggtgctctcgcac
ctgcgtctggtggtgtccatcgcgcgtaactacctcggctacggtctgccgcacgcggat
ctgatccaggagggcaatatcggcctgatgaaggccgtgaagcgcttcgaccccgcccag
ggcgttcggctcgtgtcctacgccatgcattggatcaaggccgagattcacgaatatgtg
ctgaagaactggcgcaccgtgaaggttgccacgaccaaggcccagcgcaagctgttcttc
aacctgcgcagccagaagcaaggcctgcaagcgttcacgccggaagagatcgatcaggtc
gcccgcgatctgaacgtcaagcgcgaagacgtcatcgagatggaaacgcgtatgtcgggc
ggcgatatcgccctcgaaggtcacagcgacgacggcgagagcgccagcttcgctccgatc
gcgtacctggccgactcgcatcaggagccgaccgccgtcatcgccgcacgcgagcgcgac
cacctgcaaagcgacgggctgcaaaccgcgctcggccgactcgacccgcgcagccgtcgc
atcatcgaggcccgctggctgtcggtggccgacgacggcagtggcggcgccacgcttcac
gaactggcggaagaattcggcgtgtccgccgagcgcattcgccagatcgaggtcgccgca
atgaagaagatgaaaggcgcgcttcaggcctacgcataa
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