Pandoraea pnomenusa 3kgm: U875_21345
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Entry
U875_21345 CDS
T02936
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppk03000
]
U875_21345
Transcription factors [BR:
ppk03000
]
Prokaryotic type
Helix-turn-helix
IclR family
U875_21345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
HTH_24
TrmB
Motif
Other DBs
NCBI-ProteinID:
AHB07592
LinkDB
All DBs
Position
complement(4643172..4643951)
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AA seq
259 aa
AA seq
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MDYTVASVDTALTLLSLVGECPGLGVTELAQRAGLNKSRAFRLLATLEQHRWVVREGSPV
TYVLGAQALVLGVAGHEQVNLVKVAHRHLQSLNRALNENIQLRVRDGLESLCVARVESTH
ELRVHGVVGNRRPLYVGASGRVLLAFASDDVRAQVLGRPRKRFTAGTLIERDELAAELLN
VRRQDCAVSFGELAPEAVSVAVPVRDASGEVIASLSASGPSSRMTRALLPDISSRLSACA
AEISAALGYQTPVPEALSA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggactacacagtcgcttcggtcgacacggcgctcacgctgctgtcgctggtcggggaa
tgccccggcctgggtgtgacggaactggcgcagcgcgccggtctcaacaaatcgcgggcg
tttcgtctgttggcgacgctggaacaacaccgctgggtggtgcgcgaggggagtccggtg
acctatgtgctcggcgcgcaggcgctggtgctcggcgtagccgggcacgagcaggtgaat
ctcgtgaaggtggcgcatcgtcacctccagtccctgaaccgggcgctcaacgaaaacatc
caactgcgcgtgcgcgatggcctcgaatcgctgtgcgtggcgcgcgtcgaatcgacgcac
gaactgcgcgtgcacggcgtggtcggcaatcgccgaccgctgtacgtcggcgcctcggga
cgcgtgttgcttgcgttcgcctcggatgacgtgcgtgcgcaggtgctcggccgaccccgc
aagcgattcacggccggcacgctcatcgagcgagacgaactggcggccgagttgctcaat
gtgcgacgtcaggattgcgccgtgagcttcggcgaactcgcccccgaggcagtgtccgtg
gccgtgcccgtgcgcgacgcctctggtgaagtcatcgcctccctgtcggcttcgggacct
tcgtcgcgcatgacgcgtgccctgctgcccgatatctcgtcgcgcctgtcggcatgcgcc
gccgaaatctccgctgccctcggttaccagacgccggtgccggaagccctttcggcctga
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