Pandoraea pnomenusa 3kgm: U875_22320
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Entry
U875_22320 CDS
T02936
Name
(GenBank) hemolysin
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppk03009
]
U875_22320
Enzymes [BR:
ppk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
U875_22320
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
U875_22320
Ribosome biogenesis [BR:
ppk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
U875_22320
23S rRNA modification factors
U875_22320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AHB07758
LinkDB
All DBs
Position
complement(4844146..4844949)
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AA seq
267 aa
AA seq
DB search
MSQALRADQALVCRGLAASRTAAQRLIDAGRVYYAGTETALKKASQIVADDEHIEVRAAL
DGLPDEDRYVSRGGLKLAGALAQTGLGVGGRVALDVGLSTGGFADCLLQAGVARVVGVDV
GHGQLHLRLASEPRLVSLEGINARHLSRELLDERLATASAPDAMPEAGFDLIVGDVSFIS
LTLVLPALAPLLAPAGDLLMLVKPQFEVGREHVGRGGLVKDAAQYAQVETKIRTACESLG
LTVAAWLDSPIAGGDGNREFFVHARRA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcgcttcgtgccgatcaggccctcgtctgccgggggctggccgcatcccgc
accgccgctcaacgcctcatcgatgccggacgcgtgtattacgccggcaccgaaacggcg
ttgaagaaggccagccagatcgtggcggacgatgagcacatcgaagtgcgggcggcgctc
gacggactgcccgacgaagatcgctacgtgtcgcgcggcggcctgaaacttgccggtgcg
ctcgcgcagacggggcttggcgtcggtggccgtgtggccctcgacgtcggcctgtcgacc
gggggtttcgcggactgtctgctgcaggcgggcgtggcgcgtgtcgtcggggtggatgtc
gggcatggacagttgcatctgcgtctcgcgagcgagccgaggctggtgtcgctcgagggc
atcaacgcgcggcacctgtcgcgcgagttgctcgacgagcgtctcgcaacggcgagcgca
ccggacgccatgccggaagccggcttcgatctgatcgtgggcgacgtgtcgttcatctcg
ctcacgctggtcttgcccgcgctcgcgccgttgctggccccggccggcgacctgctgatg
ctggtcaagccgcaattcgaggtcggacgcgagcatgtcggccgcggcgggcttgtgaag
gacgctgcgcagtatgcgcaagtggagacaaaaatccgcactgcctgtgaatcgctcgga
ctgacggtcgccgcatggctcgacagtcccatcgcgggcggcgacggcaaccgggagttc
ttcgtgcacgccaggcgcgcgtga
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