Pandoraea pnomenusa 3kgm: U875_22350
Help
Entry
U875_22350 CDS
T02936
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U875_22350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_22350
Enzymes [BR:
ppk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
U875_22350
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
U875_22350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AHB07764
LinkDB
All DBs
Position
4849699..4850472
Genome browser
AA seq
257 aa
AA seq
DB search
MRIITANLNGVRSAAKKGFFEWFGNQQADILCVQEIKAQLPDMTPDFLKPHDYQGYFHFA
EKKGYSGAGVYVRREPDDILIGWGNAEFDAEGRYVEVRYGSLSVISVYIPSGSSGEERQA
AKFRFMADFMPHLLELKSAGREVVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWLTQ
LFDEHGYVDVFRALDPRAEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKTTSVFRD
IKFSDHAPLIVDYDHAL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattaccgcgaatctgaacggcgtgcgatcggccgccaagaagggctttttc
gagtggttcggcaaccagcaggccgacatcctgtgcgttcaggagatcaaggcacaactg
cccgacatgacgccggatttcctcaagccgcacgactatcagggctacttccacttcgcc
gaaaagaagggctacagcggcgctggcgtgtacgtgcgccgggagcccgacgacatcctc
atcggctggggcaacgccgagttcgacgccgagggccgttatgtcgaagtgcgctacggt
tcgttgtcggtcatctccgtgtacattccgtcgggttcgagcggcgaggaacgtcaggcg
gccaagtttcgcttcatggccgacttcatgccgcatctgctcgaactgaagtccgctggc
cgggaagtcgtgctgtgcggcgacgtgaacatcgcgcacaaggaaatcgacatcaagaac
tggaagggcaacctgaagaattccggtttcctgccagaagagcgcgcgtggctcacgcag
ttgtttgacgaacatggctatgtcgacgtgttccgcgcgctcgacccgcgcgcggaacag
tacacgtggtggagcaaccgcggccaggcgtatgcgaagaacgtggggtggcgcatcgat
taccagatcgccacgcctggcatcgcgggcaaggcgaagaccacctcggtctttcgcgac
atcaagttcagcgatcatgcgcccctgatcgtcgactacgaccacgccttgtaa
DBGET
integrated database retrieval system
