Pandoraea pnomenusa 3kgm: U875_22575
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Entry
U875_22575 CDS
T02936
Name
(GenBank) recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppk03036
]
U875_22575
Chromosome and associated proteins [BR:
ppk03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
U875_22575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AHB07806
LinkDB
All DBs
Position
complement(4895894..4896811)
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AA seq
305 aa
AA seq
DB search
MEPGIRAYLTSLASERKLAGLTLENYTRDLRQLQRLAGGRALESLQHGDIRRFVMQLHGE
GLVGRSIARKLSAWRGYFAWLAQRTALVANPVEGVRAPKQPKPLPKALSPDQASALVEFE
SGTSAEAVRNRAMFELLYSSGLRLSELTSLDHRYVDADGYRSISWLDLPEREVVVTGKGN
KRRRVPVGEKAAQALAQWLDKRAPLATAEPHALFLSARGKRIGSRAVQQGLAHHAQAAGL
PTHVHPHMLRHSFATHVLQSSGDLRAVQEMLGHSNISTTQIYTKLDFQHLAKVYDQAHPR
SRKKP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ctggaacccggcattcgcgcctatctcacctcgctggccagcgagcgcaagctcgccggc
ctcaccctggaaaactacacgcgcgacctgcgtcagttgcagcgtctggcgggcggacgt
gcgctcgagtcactgcagcacggcgatattcgacggttcgtgatgcaactgcacggcgag
ggcctcgtcggccgctccatcgcacgcaagctctcggcgtggcgcggatacttcgcatgg
ctcgcgcagcgcaccgcgctcgtggccaatcccgtcgaaggcgtgcgtgcgccgaagcag
cccaagcccttgcccaaggcgctctcacccgatcaggcttcggcgctcgtcgagttcgaa
tccggcacgtcggccgaggccgtgcgcaaccgcgcgatgttcgagttgctgtattcgtcg
gggctgcggctctccgagctcacgagcctggaccatcgctacgtcgacgccgatggatac
cgctcgatcagttggctcgacctgccggagcgcgaagtggttgtcaccggcaaggggaac
aagcgtcgacgggtgcccgtgggcgagaaagccgcgcaggcgctggcccagtggctcgac
aagcgtgcaccgcttgccaccgccgagccgcatgcgctgttcctgtcggcacgcggcaaa
cgcatcgggtcgcgcgcggtgcagcaggggctcgcgcatcacgcgcaggcggccggactg
cccacgcacgtgcatccgcacatgctgcgccactcgttcgccacgcatgtgttgcagtcc
tcgggcgatctgcgcgcggttcaggaaatgctcggccacagcaacatttccacgacacag
atctacacgaagctcgacttccagcatctcgccaaggtctacgaccaggcgcatccgcgc
tcgcgcaagaagccctga
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