Pandoraea pnomenusa 3kgm: U875_23475
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Entry
U875_23475 CDS
T02936
Name
(GenBank) Short chain fatty acid transporter
KO
K02106
short-chain fatty acids transporter
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U875_23475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCFA_trans
DcuC
Motif
Other DBs
NCBI-ProteinID:
AHB07941
LinkDB
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Position
complement(5097184..5098632)
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AA seq
482 aa
AA seq
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MKSGNSLSNTLPSPEEGGFLERLAASVTRWSERWFPDAYLFAALAVIVCAAGALAIGVPA
AKVGVAFGDGFWSLIPFTMQMAIVAISGYVVAVSPPAAMLIRRMAALPRSGRSAVAYVAF
VSIALSLFNWAISLVFSGLLVRAIARRDDIRMDYRAGGAAAYLGMGATWALGLSSSAAQL
QANPASLPKALVEITGVIPFSETIFLPQSMAIAAVLTVVSVILAYYSAPRDARAKVAADL
GVSLDDTTKTYVRPQRPGEWLEYSPLVTVLIVALGLVWIGNEFTTKDPLIAISNLNTYNF
VFLMLGMLLNWRPRRFLDAIARSVPSVAGVLIQFPLYGGIAYLLTKAPGIDGQTLSHHLS
SFFVAVSSQASFPGVMGVYSAVLGFFVPSGGGKWIIEAPYVMQAANDLHVHLGWAVTVYN
AAEALPNLINPFWMLPLLGVLGLRARDVVGYTFTQLLVHFPVVIVMLWWLARTLEYRPPV
MP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgggaaactcactatcgaacacgctaccgtcgccggaggaaggcggctttctc
gagcgactggcggcatcggtcacacgttggtcggaacgctggtttcccgacgcgtatctg
tttgccgcgctggccgttatcgtatgtgccgccggcgcgctcgcgatcggcgtacccgcg
gcgaaggtcggggtggccttcggagacggcttctggagcctgattccgttcacgatgcaa
atggcgatcgtggccatttccggttatgtcgtggcggtttctccaccggccgcgatgctg
atccgcaggatggccgccttgccccgcagcggtcgcagcgcggtggcgtacgtggccttc
gtgagcatcgcgctctcactgttcaactgggcaatcagcctggtgttcagcggcctgctg
gtgcgcgccattgcgcgtcgggacgacattcgcatggattaccgggcggggggcgcggcc
gcctacctcggcatgggggcgacctgggcactggggctcagctcctccgcggcgcagttg
caggccaacccggccagcctgcccaaggcgctggtcgaaatcacgggcgtgattccgttc
tcggagactatcttcctgccgcagtcgatggcgatcgcggccgtgttgacggtcgtctcg
gtcatcctcgcttactattcggcaccgcgcgatgcccgcgccaaagtcgccgctgatctg
ggggtgtcgctggacgacacgaccaagacgtatgtgcggccacagcgtccgggcgaatgg
ctcgaatacagtccgctcgtcacggtcctgatcgttgcgctggggctggtgtggatcggt
aacgagttcacgacgaaggacccgctcatcgcgatttcgaacctgaacacctataacttc
gtcttcctgatgctgggcatgctgttgaactggcgcccgcgccgcttcctcgacgccatc
gccaggtcggtgccgtccgtggcgggggtactcattcagttcccgctgtatggcggcatt
gcctatctgctcacgaaagcacccggcatcgacgggcagaccctgtctcaccatctgtcg
agtttcttcgtggccgtctcgtcgcaggcgtcgttccccggcgtgatgggcgtgtactcg
gcggtgctgggcttcttcgtgccctcgggcggcggcaagtggatcatcgaggcgccctac
gtgatgcaggccgcgaacgatctgcacgtgcaccttggctgggccgtaacggtgtacaac
gccgccgaagcgctgccgaatctcatcaacccgttctggatgttgccgctgcttggcgtg
ctgggtctgcgcgcgcgtgacgtggtcggctacacgttcacgcaactgctggtgcacttc
ccggtggtcatcgtcatgctctggtggctcgcccgaacgctcgagtatcgcccgccggtc
atgccgtga
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