Pandoraea pnomenusa 3kgm: U875_24645
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Entry
U875_24645 CDS
T02936
Name
(GenBank) hypothetical protein
KO
K15345
secreted effector protein SseC
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_24645
Transporters [BR:
ppk02000
]
Other transporters
Pores ion channels [TC:
1
]
U875_24645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
Motif
Other DBs
NCBI-ProteinID:
AHB08764
LinkDB
All DBs
Position
5371534..5372961
Genome browser
AA seq
475 aa
AA seq
DB search
MAPGSMPDAGGISRRPHGRGDWLGPEDFLPDAPAGVDWHDADDAFARVLQRLHLMSGALA
ANGVRPDGQFGVTDLESVETLDPSTLVMVASMIAMQALGDTAKSTQTALALLAERQEKLR
QEDIQKFREQMDAMTADADKARKGGVFGAIFDWITAAIDLVVGVVKVVTGVLTMNPLMIA
GGIADVGAGIAGIGSAVCKTMALIDPKHAEYYEQEAAKWGHAQMAFQALGMVVGFGTSVR
GFLASRSVTKAATRAFKGGAGEALTQAVKAGDDAAVSAIRARVVSEVSYQVGMEVGKRVG
RSLAQCGTRTARQLARRGFNRMAEQFTQQMVEQMVSRAFDNVVKSTAKQVAKGVAVRAAD
VTRAFGSQAASQGRRAILRGMWSLSAVLRGAMVAGRDITAGAIGIQRAKLQREARDLQVE
TTWLQFLMEMNGDDKRRLAQRMQALSAQQGDAAQTASEAVASTGALRIRIAASMA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccgggctcgatgcccgatgccggcgggatctcgcgccgcccgcacggccgcggc
gactggctcgggccggaagatttcctgcccgacgcgcccgcgggcgtcgactggcacgac
gccgatgacgcattcgcccgcgtgctgcaacgtctgcatctgatgagcggggcgttggcg
gccaacggcgtgcgacccgatgggcagttcggcgtgaccgacctggagagcgtggagacg
ttggacccgtcgacgctcgtgatggtcgcgtcgatgatcgccatgcaagccctgggggac
accgctaagtcaacgcagacggcgttggcgctgctggccgaacgtcaggagaagctgcgt
caggaggacattcagaagtttcgcgagcagatggacgccatgaccgcggacgccgacaag
gcgcgcaagggcggcgtgttcggcgcgatcttcgactggatcacggcggcgatcgatctc
gtcgtgggcgttgtcaaggtcgtgaccggcgtactgacgatgaatccgctgatgatcgcc
ggcggcatcgccgacgtgggagccggcatcgcgggcattggctcggcggtctgcaagacg
atggcattgatcgatccgaagcacgcggaatactacgagcaggaagccgcgaaatggggg
catgcgcagatggcgtttcaggcgctgggcatggttgtcggattcgggacgtctgtgcgc
ggctttctcgcctcgcgatccgtgacgaaagcggccacgcgcgcgttcaagggcggggcg
ggcgaggcactgacgcaggccgtcaaggcaggcgacgatgccgccgtgagcgcgatccgc
gcacgcgtggtctccgaggtgtcgtaccaggtcggcatggaagtcggcaagcgcgttggc
cggtcgctcgcgcaatgtggcacacgtaccgcacggcaactcgcgcggcgtggtttcaat
cgcatggccgagcagttcacgcagcagatggtcgaacagatggtgtcgcgcgccttcgac
aacgtcgtcaaatcgacggcaaagcaggtggcgaagggcgtcgcggtgagggcggccgac
gtgaccagggcgttcggcagtcaggcagcgtcgcagggtcgccgggccatcctgcgcggc
atgtggtcgctctcggcggtgctgcgcggcgcgatggtggccggacgcgacattaccgcg
ggcgccatcggcatccagcgcgcgaagttgcagcgcgaggcgcgtgacctgcaggtcgag
acgacctggctccagttcctcatggagatgaacggcgacgacaagcgacgtcttgcccaa
cgcatgcaggcgttgtccgcgcagcagggcgacgcggcgcagacggcgagcgaagccgtc
gcaagcaccggcgcgctgcgcattcgcatagcggcgtcgatggcctga
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