Pandoraea pnomenusa 3kgm: U875_26580
Help
Entry
U875_26580 CDS
T02936
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
ppk
Pandoraea pnomenusa 3kgm
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppk02000
]
U875_26580
Transporters [BR:
ppk02000
]
Other transporters
Pores ion channels [TC:
1
]
U875_26580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
AbiGi
Motif
Other DBs
NCBI-ProteinID:
AIM44001
LinkDB
All DBs
Position
complement(3829321..3831204)
Genome browser
AA seq
627 aa
AA seq
DB search
MRKPSRFHAPSRFALAAALLATGAAAQAQSSASSASSDATLNTTVVTASRSEQKLADTLA
STSVITRAQIEASQAQDLPSLLRGQAGVEIVQNGGFGTSASLFMRGAASNASLVLIDGVP
VNSATTGTTNIAQIPVSQIDHIEIVRGNVSALYGSQAVGGVIQIFTRQGDGGPPKAHAEV
GYGTNNTTQANAGIAGSFEDGKTRFSLDVSRFHTNGISAQDPRFLPKANPNRNGDDNTSV
SASLSRKLGDTWEVGARLFQSDGSSSYDNAFGKPTDLNDTDARVRQLSAYAKGNVTDKWN
TRLSVTQGDDYSYNYLNGKGNGNFHTSTNQIDWANEYVFMPDQKLIGGYTRQEQTVDGST
VYNRNNRHLDSFYVGYEGVFARKHEVQATVRRDIYSDFGGANSYWVGYGYRLTPQWKLMA
NASDGFRAPTFNELFYPGFGNPNLQPERSISKELAVQFYDERFGLAKLALFRTNYTNLIQ
SLTVSPYTAANVANARVEGLELTYQGKIQWTGTDVRASFTRQNPTDLDANKVLARRAKQF
ASVGVTQKFLGKYSVGGDVFYSGERYDTGGQHLGAYTLVNLQARYDIDKSWYVSAHLDNV
FNKNYQTVYGYNTLGRAIYVSLGWKQF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcaagccctcgcggtttcacgccccgagtcgtttcgcccttgccgccgccctgctg
gcgaccggcgcggcggcgcaggcgcaatcgtccgcctcgtccgcctcgtccgacgccaca
ctcaacaccaccgtcgtgaccgcgtcgcgcagcgagcagaagctcgcggataccctggcc
tccacctcggtcatcacgcgcgcccagatcgaggccagccaggcgcaggacctgccttcg
ttgctgcgcggtcaggcgggcgtggaaatcgtccagaacggtggcttcggcacgtcggca
agcctcttcatgcgtggcgcggcctcgaacgcctcgctggtgctcatcgacggcgtgccg
gtgaattcggccacgaccggcacgaccaacatcgcccagattcccgtgtcgcaaatcgat
catatcgagatcgtgcgcggcaatgtctcggcgctgtacgggtcgcaagcggtgggcggc
gtgatccagatcttcacgcgccagggtgacggcggcccgcccaaggcgcacgccgaagtc
ggctacggcacgaacaacaccacgcaggccaacgccggcatcgcggggtcgttcgaagat
ggcaagacgcgcttctcgctggacgtctcgcgctttcacaccaacggcatctccgcgcag
gacccgcgtttcctcccgaaagccaacccgaaccgcaacggcgacgacaacacgagcgtg
agtgcgtcgctctcgcgcaagctcggcgacacgtgggaggtcggcgcgcgcctgttccag
agcgacggcagcagcagctacgacaacgccttcggcaagcccaccgacctgaacgacacc
gatgcacgcgtgcgccagctctccgcctacgcgaagggcaacgtcaccgacaagtggaac
acgcgcctgagcgtcacgcagggcgacgactacagctacaactacctgaacggcaaaggc
aacggcaacttccacacgtcgaccaaccagatcgactgggccaacgaatatgtcttcatg
ccggaccagaagctgatcggcggctacacgcgccaggagcagacggtcgacggcagcacg
gtctacaaccgcaacaaccgccacctcgactccttctacgtgggctacgaaggcgtcttc
gcgcgcaagcacgaggtgcaggccaccgtgcgtcgcgacatctactccgatttcggcggc
gcgaacagttactgggtcggctacggctatcgcctcacgccgcagtggaagctgatggcc
aacgcatcggacggtttccgcgcaccgactttcaacgaactgttctaccccggcttcggc
aatccgaacctgcaacccgagcgctccatctcgaaggaactcgccgtgcagttctacgac
gagcgtttcggcctggccaagctggccctgtttcgcaccaactacacgaacctgatccag
tcgctcaccgtatcgccctacacggcggcgaacgtggcgaacgcccgtgtcgagggcctg
gagctgacctatcagggcaagatccagtggacgggcacggacgtacgggcctcgttcacc
cggcagaacccgacggatctcgatgccaacaaggtgctcgcgcgccgcgcgaagcaattc
gcctcggtcggtgtgacgcagaagttcctcggcaagtattcggtcggtggcgatgtgttc
tacagcggcgagcgttacgatacgggcggtcagcatctcggcgcctacacgctcgtgaac
ttgcaggcacgctacgatatcgacaaatcctggtacgtctcggcgcatctggacaacgtc
ttcaacaagaactaccagacggtttatggctacaacaccctcgggcgagcaatctacgtc
tcgctcggctggaagcagttctga
DBGET
integrated database retrieval system
