Postia placenta: POSPLDRAFT_102449
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Entry
POSPLDRAFT_102449 CDS
T01162
Name
(GenBank) predicted protein
KO
K14328
regulator of nonsense transcripts 3
Organism
ppl
Postia placenta
Pathway
ppl03013
Nucleocytoplasmic transport
ppl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
POSPLDRAFT_102449
03015 mRNA surveillance pathway
POSPLDRAFT_102449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppl03019
]
POSPLDRAFT_102449
Messenger RNA biogenesis [BR:
ppl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
POSPLDRAFT_102449
mRNA cycle factors
P-body specific factors
POSPLDRAFT_102449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-ProteinID:
EED84142
JGI:
102449
LinkDB
All DBs
AA seq
479 aa
AA seq
DB search
MSPSETAKPISSPNAKAKTKEKEKRARAASKQQTERLKTVVRRLPPNLPENIFWQSVEPW
VREDTVTWKAYYLGKSKKRLNKENISSRAYIAFKNEDVLATFSKEYDGHVFRDKAGNESI
AVVEFAPYQKVPSDKKKVDTRMGTIEKDEEYISFLESLKEGSNKPVDGESLDILIIPSAV
AASQPPPQPTTTPLLEALKAEKSAQKDKEAILRNHAHYKDQAAIAGPSIVVKKEDGKKKS
AALASQKPSDSQPSKKAAKKAAKNAAQQQTAPAAAPSKPPQSKQAQAQPAQAVIPKAPRQ
PRERHPKPSIAQPAPTPSSSAPSGDAAPSSISIASAASTSTQDSAQPAPTRRARPMLGPA
SRQFEAALSGAGVERKARRERDRQTATDVGPAGAVGLGDGAGRGEEKRGSGASRATPAGQ
NQATPTAPMILQREGQQIKVGGGPPAVASDVDDGAAGGRSGGKPRSRGRGRGAQRGGAP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccccaagcgagacagcaaagccgataagcagccccaacgcgaaagcgaagacaaag
gagaaagagaagcgagcacgcgccgcgagcaaacagcagacggagcggctgaagacagtc
gtccgccgtctaccgcctaacctccctgagaacatcttctggcaaagcgtggagccgtgg
gtgagggaggacacagtaacatggaaggcatattacctggggaagtctaagaagaggtta
aacaaggagaacatctcctcccgcgcatatatcgccttcaaaaacgaggacgtactcgcg
acgtttagtaaggagtatgatggtcacgtctttagagacaaagcagggaatgagtccatt
gcggtggtcgagtttgcgccctatcagaaggtaccgtccgacaagaagaaggtggatacc
cgtatgggaactatcgagaaggacgaggagtatatctcattcttggagtctcttaaagag
ggctcgaacaagccagtggatggagagagcttggacattctcataatcccttccgcagtt
gcagcatcccagccgccaccgcagccaacaactacacccctcctcgaggctctcaaagct
gagaagtctgcgcagaaggacaaggaagccattctccgcaaccacgcgcactacaaggac
caggcagccatagctggcccaagcatcgttgtgaagaaagaagacggcaagaagaagtct
gctgcactcgcttcacagaagccttcagactcacagccgagcaagaaggctgcaaagaaa
gctgcaaagaacgccgcgcaacaacagaccgcaccggctgctgctccttcgaaaccacca
cagagcaaacaggcgcaagcacagcctgctcaagctgtgatcccgaaagcacctcggcag
cctcgcgagcgccaccccaaaccgtccattgctcaacctgcgccaaccccatcgtccagc
gcaccctcaggcgacgcggcgccatcgtccatatccatcgcttccgccgcatcgacatcg
actcaggattctgcacagccggcgccgacacggcgcgcacggcccatgctagggcccgca
tcacggcagtttgaggcggctctcagcggcgctggcgtcgagcgcaaggcgcggcgggag
cgcgaccgccagaccgcaaccgatgtgggtcctgcaggtgccgttggtctcggagacggt
gcagggagaggagaggagaagcggggcagcggagcgtcgcgcgctacgcccgcaggccag
aatcaggctacaccgactgctccgatgatactacagcgtgagggccagcagatcaaggtt
ggtggtggcccgcccgcggtcgcaagcgatgttgacgatggtgccgctggagggaggagc
ggcggtaaaccgcgctctcgaggaagaggtcgtggggctcagcgaggtggtgctccgtag
DBGET
integrated database retrieval system