Postia placenta: POSPLDRAFT_103942
Help
Entry
POSPLDRAFT_103942 CDS
T01162
Name
(GenBank) predicted protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
ppl
Postia placenta
Pathway
ppl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
POSPLDRAFT_103942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppl03400
]
POSPLDRAFT_103942
DNA repair and recombination proteins [BR:
ppl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
POSPLDRAFT_103942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
DUF6534
DNA_Packaging_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
EED79742
JGI:
103942
LinkDB
All DBs
AA seq
1044 aa
AA seq
DB search
MTEGIESTFGALLIGVLVSAMFLSIVWSWKGTIISSVQVAMHLGQIIHGPHLATGCVYLQ
LKLLSSLLSGHDFSTVVASYEMQVIAKVWMTKVAEILPRTDVVSPEALLGQKWTSYYLLS
LWTVTDLMIAGYLCYLIHSKRTGWRRSDRMIMNLVFYTINGGFCTRTWTLVSIVVTKGPI
IALLNARESLRDVAAQAENTVIVLHPLNPSSPGSRYERRFRSMLPREDQVMSVTVEGSDS
GVPGAQEEDITSASSSSHHASLRGKGDKEDNSVQLIAKLDALYVAAHFFRTNSVIKYLGP
GGKSGLPSVNLTESVAKTLLREALTAKQLKVEIWVPEAGQGKKATRFKLDKEASPGNLQA
VEDMLFVNTDILSAPIVMAIKIMSTPAAVAASSKAKTKTVGIAFADTNTREIGVADFVDN
DLFSNVETLVIQLSVKEALIPTGTTSGTTERDIELKKVKELLERCGVVITERKPSEFTAK
NIKDDMTQLLTPSSLPSSSNVDASLVVPELSLPVAPSALSALVSYLSLLSDPSNRGAYSI
RTHDLSQFMKLDASALRALNLTEAPGNIGSNKNTTLFGLLNKCKTAQGSRLLGSWLKQPL
VNLHEIHKRQNLVEIFVEDTSTRRSLQDEYLKMMPDMHRICKRFGKSVASLEDVVRVYQA
ILKLEGLIATLEGVETGEDYKALIDEAYLAKLRDFDISLSKYSEMVQQTLDLDELEHHNF
VIKPEYDSRLQALADKLKEIRDSLDEEHQEVDESEFQIITGPNMGGKSTYIRQTGVIVLM
AQTGSFVPCSEASIPIFDSVLCRVGAGDSQLKGISTFMAEMLETATILRNIIHQSLIKSA
SKDSLIIIDELGRGTSTYDGFGLAWAISEHIASEIHAFCLFATHFHELTALDQESPHVKN
LHVVAHVSKSDDSTHERDITLLYKVEPGVCDQSFGIHVAELANFPENVVKLAKRTADELE
DFNSDSKAGEPQLPPEVVEEGTRIVEELLRTWASQISERDGDDVMMEDSEDPAADELEKL
KRCVEQFRPQIEGNAWVQHLLASL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaggcatcgagtcaacgttcggagctctgctaattggagttcttgtgtctgcc
atgtttctgtcaattgtatggagctggaagggtaccatcatttcttccgtccaagtagcc
atgcacctgggtcagattatacacggtccgcatttggctactggttgcgtctacttgcag
cttaagctactctcgtctctgctttccgggcatgatttttccaccgtagtagcctcgtat
gaaatgcaagtgatcgctaaagtgtggatgacgaaagttgctgaaattctgcccaggacg
gacgtcgtatcaccggaagcccttcttggacagaagtggacctcatattacctgctctcc
ttgtggacagttaccgatttaatgatcgctggatacctatgttacctgattcacagcaaa
cgcacaggctggcgcaggtctgaccgcatgatcatgaatctggtattctacaccattaac
ggtggtttctgtacaagaacttggacattagtctcgattgttgtgacgaagggccccatt
attgctttgcttaatgcacgagaatcgctacgcgacgtagctgctcaagctgagaataca
gtcatcgttctccacccactcaacccctcgtcacccggttcgcgctatgaacgaagattc
cgtagtatgctcccacgagaggatcaagtcatgagtgtcacggttgagggctctgactca
ggcgttcccggtgcacaagaagaggacatcacatcggcttcatcctcgtcccaccacgca
tcccttcggggaaagggagacaaggaagacaattctgtgcaattgatcgcgaagctcgac
gcactctatgttgctgcgcacttcttccgcacaaatagtgtcatcaaatatcttgggccc
ggcggaaagtcaggtctgccgagcgtgaacctgacggagagtgtagcgaagaccctccta
cgggaggcgttgacagcaaagcagctcaaggttgagatttgggtgccagaagccggccag
gggaagaaggcaacaaggttcaagctggacaaggaggcatcgcctggtaatctccaagct
gtggaggacatgcttttcgtcaacacggatattctctctgctcctattgttatggctatt
aagatcatgagtacccccgctgctgttgctgcgtcatcgaaggcaaagacgaagaccgtt
ggcatcgcctttgcagacaccaacacgcgcgagatcggcgttgcggacttcgttgacaat
gacttgttttcaaatgttgagactttggtcattcagctgtctgtcaaagaggcactgatt
cctacaggaacaacgtccggtactacagagcgagacattgagctcaaaaaggtcaaggaa
ctcttggagcgttgtggtgttgtcatcacggagcggaaacctagcgaattcactgcgaag
aatatcaaggatgacatgacacagctgctgacgcccagctcattaccatcctcatcaaac
gttgatgcttcgctggtcgttcccgagttgtctctgcctgtcgccccctccgcactctct
gccctcgtgtcctatctttctttgctctcggatccgtccaatcgcggagcatatagtatt
cgcacgcacgatttgtcgcagttcatgaagctcgatgcgagtgccctccgtgctctgaat
ctcactgaggctcccggtaacatcggctcgaacaaaaacacgaccttgtttggcctgctc
aataaatgcaagacagctcaaggctcgcggctactcgggagctggctcaagcagccgctc
gtgaacttacatgagattcacaagcgacaaaatttagtcgagatcttcgtcgaagatacg
agcacacgaaggtcattgcaggatgagtatctaaaaatgatgcctgatatgcatcgcatc
tgtaaaagattcggaaaatcagtggcctcccttgaagatgtagtacgcgtatatcaagcg
atcctgaaactcgagggcctgatcgccacgttggagggtgtcgagacaggagaagattat
aaagcactcatcgatgaagcctatcttgctaagttacgggactttgacataagcttatcg
aagtactcagaaatggtgcaacagacacttgacctcgatgagcttgaacaccacaacttc
gtcatcaagcctgaatatgactcgcgtctccaagcccttgcagataagctcaaggagatt
cgcgatagcctcgatgaagagcatcaagaagttgacgagagcgagttccagatcataacg
ggtcccaacatgggcggcaagagcacttatatccgacagaccggtgtaattgtcctgatg
gcgcaaacgggcagctttgtcccctgttcagaagcgagcatacccatctttgattcagtt
ctctgtcgtgttggtgctggcgacagtcaactcaaggggatatcaacatttatggccgag
atgcttgaaacggctactattcttaggaatattattcaccaatccttgattaagtcggcg
tcgaaggattctctcattatcatcgacgagctaggacgaggcacgtctacgtatgacgga
ttcggcctggcttgggccatctctgaacatattgcatcggagatccacgcattctgcttg
tttgcaacgcattttcatgaacttaccgcactcgatcaagagagcccacatgtcaaaaat
ctacatgtcgttgctcatgtctcgaaatcagatgatagcactcatgaacgcgatatcact
ctgctgtacaaggtagaaccaggcgtatgtgatcagagctttggtatccatgtcgcagag
ctggcgaactttcctgaaaatgttgtgaagcttgcgaaacgtacggcggacgaattagaa
gacttcaacagcgattccaaggccggagaacctcagttgcctccagaggtcgtcgaagaa
ggtacccgcattgtcgaagaactgctacgaacgtgggcatcacaaatctcagagcgcgac
ggcgatgatgtcatgatggaagactctgaggatcctgccgccgacgaactggagaagctg
aagagatgtgtcgaacaatttcgtcctcaaattgagggtaatgcgtgggttcaacatctt
ctggcttctttatga
DBGET
integrated database retrieval system
