Postia placenta: POSPLDRAFT_29615
Help
Entry
POSPLDRAFT_29615 CDS
T01162
Name
(GenBank) predicted protein
KO
K10754
replication factor C subunit 1
Organism
ppl
Postia placenta
Pathway
ppl03030
DNA replication
ppl03410
Base excision repair
ppl03420
Nucleotide excision repair
ppl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
POSPLDRAFT_29615
03410 Base excision repair
POSPLDRAFT_29615
03420 Nucleotide excision repair
POSPLDRAFT_29615
03430 Mismatch repair
POSPLDRAFT_29615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppl03032
]
POSPLDRAFT_29615
03400 DNA repair and recombination proteins [BR:
ppl03400
]
POSPLDRAFT_29615
DNA replication proteins [BR:
ppl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
POSPLDRAFT_29615
DNA repair and recombination proteins [BR:
ppl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
POSPLDRAFT_29615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_5
AAA_14
RuvB_N
AAA_16
AAA_18
NTPase_1
AAA_22
AAA_assoc_2
AAA_24
AAA_30
Motif
Other DBs
NCBI-ProteinID:
EED84404
JGI:
29615
LinkDB
All DBs
AA seq
697 aa
AA seq
DB search
PGSKPIPQAAAPDCLTGLTFVFTGELSSLSRDEAIELAKRHGGRVTGQPSSKTSFVVLGS
DAGPSKLAAIKKNNLTTLDEDSFLQLIATRVPDPNKLDNKTKKKQEKEEEAIRTAAKEME
RREKQTAQGGGAKGTSANPAIANQLWTNRYAPQTLKEICGNKGQVEKLQRWLDDWPSNLK
ANFKKPGKDGMNVFRAVLITGPPGIGKTTSAHLCAKLQGFTPIELNASDARSKKLVEVGS
FTCSSDERTSNAVGVTITDKTCLIMDEVDGMSAGDRGGVGALAALIRKTKIPIICIANDR
GAPKMKPLSNAAYNLTFRRPEATTIRSRILSIAFKEKMKIPANVIDQLIEGAQSDIRQVL
NMLSTWKLSNDTMNFDEGKALAKANEKYGIMTPFNIIQKMLGPYMFSPTARETLNDKMEL
YFHDHSFVPLFIQENYLKTQPAKIRNIDGPEKILKQLQLMDKAASSISDGDLVDSLIHGY
IRHSLPKISQQHWSLMPLHAVCSTVRPASFLYGMGAAYVVCVRWLGQNSKQNKLVRQLTE
IQARMRVKVSGDKTEIRQSYTPALFPHIVKPLMDEGASAVDEVIERMDDYFLTREDWDTI
VELGLDHNKDDIVLKKISTATKTSFTKKYNSRDHPIPFYKAQDFGKAPKKLAAGPLPDLE
EFLDVDDDVEEIAEDTNETSDNDIEHDRLIKAPKKGK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ccaggctcgaagcccattcctcaagcagcagctccagattgtctaacagggctcacgttt
gtctttacaggcgaactcagcagcttatcccgcgatgaggcgatcgaactggccaaacgt
catggcggtcgtgtaacaggccaaccctcttctaaaacatcattcgtcgtcctcgggtct
gatgctggcccaagcaagcttgccgcaatcaagaagaacaacctcacgacgctcgatgag
gacagcttcctacagctgatcgcgacgcgtgtgcccgacccgaataaattggacaataag
acaaaaaagaagcaggagaaagaggaggaggcaattcgtaccgcagcgaaggagatggaa
cggcgcgagaaacaaactgcgcaaggcggcggcgcgaagggtacgagcgcgaatccggca
atcgcgaatcaactatggacaaatcggtatgcaccacagacgctcaaagagatctgcggc
aacaagggccaggtcgagaagttgcagcggtggttggacgactggccgtcaaacctcaag
gcaaacttcaagaagcccggcaaggacgggatgaatgtcttccgcgctgtcttgatcacg
ggtcctccaggcatcgggaagacgacaagcgctcacttgtgtgcgaaacttcaagggttc
actcccatcgagttgaatgcgagtgatgcgagaagcaagaagctcgtcgaggtgggctcg
tttacttgctcgagcgatgagcgtacgtcaaacgcagtcggtgtaacgatcacggataag
acatgtttgatcatggatgaggtggatggtatgtctgctggagacagagggggtgttggt
gctctcgcagccctgatccgcaagacgaagatcccgatcatatgtattgccaatgatcga
ggggctcctaaaatgaaaccattgtccaacgctgcgtacaatttaacgttcaggcgacca
gaggcgaccaccattcgctcgagaattctctccattgccttcaaagagaaaatgaagatt
cctgccaatgtcatcgatcaactaatcgaaggtgcccaatcggatatacgacaagtcttg
aatatgctctccacatggaagttatctaacgacacgatgaacttcgacgaaggcaaggct
cttgcaaaggcaaatgagaagtatggaatcatgacaccgttcaacatcatccagaagatg
ttgggtccatacatgttctcacccacagcccgggagactttgaatgacaaaatggaattg
tacttccacgatcactcgtttgttcctttgttcattcaggagaactacttgaaaacccaa
cctgccaagatccggaatatcgacggccctgagaagatactgaagcaactacagctgatg
gacaaggcagcctcatcgatctctgatggcgacctcgttgactctctcatccatgggtac
atccgacattcactacctaaaatatcccaacagcattggtcgctcatgccactacatgct
gtgtgctcaacagttcgcccagcgtccttcctgtatggtatgggagccgcatacgttgtg
tgcgtcagatggcttggccagaactccaagcagaacaagttagtgcggcaattgactgag
atccaggcgcgcatgcgtgtcaaggtctctggagacaaaaccgagatccgacaatcatat
acgcctgcactattcccgcacatcgtgaagccgctcatggatgaaggcgctagcgctgtc
gacgaagtaatcgaacgcatggacgattacttcctcacgcgagaagactgggacacaatt
gtagagctgggcctcgaccataacaaggatgatattgtccttaagaagatctcaactgcg
acaaagacatcattcacaaaaaaatacaactccagagaccatcccattcccttctacaag
gctcaagactttggcaaggcacccaagaaactggctgctggtccactgcccgatctcgag
gagtttctcgatgtcgatgacgatgtggaggaaattgcggaggacactaacgaaacctcc
gacaacgatatcgagcatgatcgccttatcaaggcaccgaagaaaggtaag
DBGET
integrated database retrieval system
