Postia placenta: POSPLDRAFT_42787
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Entry
POSPLDRAFT_42787 CDS
T01162
Name
(GenBank) predicted protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ppl
Postia placenta
Pathway
ppl03018
RNA degradation
ppl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POSPLDRAFT_42787
09123 Folding, sorting and degradation
03018 RNA degradation
POSPLDRAFT_42787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppl03019
]
POSPLDRAFT_42787
03041 Spliceosome [BR:
ppl03041
]
POSPLDRAFT_42787
Messenger RNA biogenesis [BR:
ppl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
POSPLDRAFT_42787
mRNA degradation factors
5'-3' decay
Lsm complex
POSPLDRAFT_42787
Spliceosome [BR:
ppl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
POSPLDRAFT_42787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-ProteinID:
EED82649
JGI:
42787
LinkDB
All DBs
AA seq
96 aa
AA seq
DB search
QLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDRFWKLKECY
IRGSTIKYLRVPDTLLDAVKEEQNKAREAGRSARGA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
cagctccctctatccctgctgaacgccgcccaaaacaagcccatgctggtcgagctgaag
aacggcgagacgttcaacgggcatctcgtaaattgcgataactttatgaacatcaccttg
cgcgaggtgtaccagacgaacgcggacggcgaccgattctggaaattgaaggaatgctat
atcagggggagcacgatcaagtatttgcgtgtaccagacacgctgctagatgctgtgaaa
gaagagcaaaacaaggcgagagaggcgggcaggagcgcaagaggagcg
DBGET
integrated database retrieval system