KEGG   Postia placenta: POSPLDRAFT_42787
Entry
POSPLDRAFT_42787  CDS       T01162                                 
Name
(GenBank) predicted protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ppl  Postia placenta
Pathway
ppl03018  RNA degradation
ppl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    POSPLDRAFT_42787
  09123 Folding, sorting and degradation
   03018 RNA degradation
    POSPLDRAFT_42787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppl03019]
    POSPLDRAFT_42787
   03041 Spliceosome [BR:ppl03041]
    POSPLDRAFT_42787
Messenger RNA biogenesis [BR:ppl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     POSPLDRAFT_42787
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     POSPLDRAFT_42787
Spliceosome [BR:ppl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    POSPLDRAFT_42787
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-ProteinID: EED82649
JGI: 42787
LinkDB
AA seq 96 aa
QLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDRFWKLKECY
IRGSTIKYLRVPDTLLDAVKEEQNKAREAGRSARGA
NT seq 288 nt   +upstreamnt  +downstreamnt
cagctccctctatccctgctgaacgccgcccaaaacaagcccatgctggtcgagctgaag
aacggcgagacgttcaacgggcatctcgtaaattgcgataactttatgaacatcaccttg
cgcgaggtgtaccagacgaacgcggacggcgaccgattctggaaattgaaggaatgctat
atcagggggagcacgatcaagtatttgcgtgtaccagacacgctgctagatgctgtgaaa
gaagagcaaaacaaggcgagagaggcgggcaggagcgcaagaggagcg

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