KEGG   Postia placenta: POSPLDRAFT_88211
Entry
POSPLDRAFT_88211  CDS       T01162                                 
Name
(GenBank) predicted protein
  KO
K10755  replication factor C subunit 2/4
Organism
ppl  Postia placenta
Pathway
ppl03030  DNA replication
ppl03410  Base excision repair
ppl03420  Nucleotide excision repair
ppl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    POSPLDRAFT_88211
   03410 Base excision repair
    POSPLDRAFT_88211
   03420 Nucleotide excision repair
    POSPLDRAFT_88211
   03430 Mismatch repair
    POSPLDRAFT_88211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppl03032]
    POSPLDRAFT_88211
   03036 Chromosome and associated proteins [BR:ppl03036]
    POSPLDRAFT_88211
   03400 DNA repair and recombination proteins [BR:ppl03400]
    POSPLDRAFT_88211
DNA replication proteins [BR:ppl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    POSPLDRAFT_88211
  DNA Replication Termination Factors
   ELG1-RFC complex
    POSPLDRAFT_88211
Chromosome and associated proteins [BR:ppl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    POSPLDRAFT_88211
DNA repair and recombination proteins [BR:ppl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     POSPLDRAFT_88211
  Check point factors
   HRAD17(Rad24)-RFC complex
    POSPLDRAFT_88211
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_14 AAA_22 RCF1-5-like_lid AAA_16 nSTAND3 AAA_3 RuvB_N Viral_helicase1 Rad17 Mg_chelatase nSTAND_NTPase5 MeaB Gp44_lid NTPase_1 AAA_assoc_2 AAA_18 AAA_19 FtsK_SpoIIIE AAA_11 RNA_helicase ABC_tran nSTAND6 SRP54 NB-ARC DNAX_ATPase_lid
Other DBs
NCBI-ProteinID: EED79635
JGI: 88211
LinkDB
AA seq 332 aa
MASSSAKGKAPANGDTSTVPYELPWVEKYRPQVLDDIVGNAETIDRLKVIAKDGNCPHII
ISGMPGIGKTTSIHCLAHQLLGDAYKEGVLELNASDERGIDVVRNKIKAFAQKKVTLPPG
RHKIVILDEADSMTPGAQQALRRTMEIYANTTRFALACNMSNKIIEPIQSRCAILRYAKL
RDTEILKRLLEICEMEKVQYNDDGLTALIFTSEGDMRQAINNLQSTHSGFGFISGDNVFK
VCDQPHPIIVQSIIRACIKSDIDGAMEKLNELWDQGYSAVDIVVTVFRVVKTIPEYTKLE
YIKEIGWTHMRILEGVGTLIQLGGLMARLCKM
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcctcatcatcagcaaaaggcaaggcgccagctaacggcgatacgtcgaccgtgccg
tacgagctaccctgggtggagaagtatcgaccacaagtgctagacgacattgtcggaaac
gcggagactatcgaccgtctaaaagtcatagccaaggatggtaactgcccacatatcatc
atctcgggcatgccaggtatcgggaaaacaacaagcatacattgcttagcacatcaacta
ctgggggatgcatataaggagggtgtgcttgaactgaacgcgtccgacgagcgaggtatt
gacgtcgtacgcaacaaaatcaaagccttcgcgcaaaagaaggtaacgcttcctcccggg
aggcataagatcgtcatactcgacgaggcggatagtatgacaccaggagcacagcaggct
ctccgccgcacgatggaaatctatgcaaatacaacccgttttgcactagcatgtaacatg
tcgaacaagattatcgagcctatacaaagtcgttgtgctattctccgatatgctaaactg
cgcgacacggagatcctcaagcggctattggaaatctgtgagatggagaaggtgcaatac
aatgatgacggtctcactgcgttgattttcacctcagaaggcgacatgcgacaagcaata
aataatttgcagtcgacacactctggtttcggctttatctcaggggacaacgtcttcaag
gtctgcgatcagccacatcccatcattgttcagagcatcattcgtgcatgcatcaaaagc
gatattgacggcgcaatggagaagctcaacgaactatgggaccaaggctacagtgcagtg
gacatagtggtgactgttttccgggtcgtgaagacaattcctgagtacacaaagcttgaa
tacatcaaggaaatcggatggacacacatgcgcattttagaaggtgtgggtaccctcata
caactgggtgggctaatggcccgtctttgcaaaatgtag

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