Postia placenta: POSPLDRAFT_94913
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Entry
POSPLDRAFT_94913 CDS
T01162
Name
(GenBank) predicted protein
KO
K12600
superkiller protein 3
Organism
ppl
Postia placenta
Pathway
ppl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POSPLDRAFT_94913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppl03019
]
POSPLDRAFT_94913
Messenger RNA biogenesis [BR:
ppl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
POSPLDRAFT_94913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_19
TPR_8
TPR_1
TPR_17
TPR_9
TPR_12
TPR_6
TPR_11
ANAPC3
TPR_Slam
ARM_TT21_5th
Alkyl_sulf_dimr
ARM_TT21_N
DUF7017
TPR_5
Motif
Other DBs
NCBI-ProteinID:
EED82082
JGI:
94913
LinkDB
All DBs
AA seq
703 aa
AA seq
DB search
MALERARELNPEDWICSYFIGEVQRQTGQYQEAIVAFESILTKHPHELGVLVSLGQAHLD
LGRMHVTAAYTARAESSFTSAVQVALQMIIEASSGFRRVAWKIVADAVFHLSQFTQFSDE
DLVLDVLYQLVPFVSDHPGEGLTGIVTLPLSLQKSANLPLSALEIAVAAYNYRISLDALD
ETAVASAHYDLSAALFSYSRKASAKQQLAKQEATKHIKDALRAEPGNDRYWNALGNMEFE
SRPKIAQHAYVKALDINSKSTITWTNLGLLYLHHGDTELANEAFYKAQTLDPDYALAWVG
QGLVASLNGHAPEARALFEHAVGLSAPVPDADVEFAKRVFSQLNTTAQIRPSQLDAISPA
FFVLDRFCRGRPHDASALHLFGLVCERIGHIELGIDIIGRAIVLLEAAYEDTEDPVVERR
FSIAHTNMARLRLSVQDYEGALESYQVVTGLLPEDSEDRSARILLTQARFGAGLAQFKLG
QLAEALALFEAALDTAADEPDMRGHVIVMLAQTLWAMGTEEGRESAKAQLLQSIESDPDN
LLAINTLAGMGILTDDDSLVDAALSEILALPPDQRLARDPDREVTYLLVQHHLGQRHQTQ
GDVQQALSVSQKAVIVEPSRPEIRQTLAELVLQQGDGEGSLAVLAATHQESLAQQRDSLY
LRAIARCVNAKTQEEAHQLAHKAVMLTPWDKRNWQALAFVKST
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcactggagcgtgcgcgcgagctcaatccggaagactggatctgctcctacttcatc
ggtgaggtacagcggcagaccggtcaataccaagaagccatcgtagcgttcgagtccatc
ttgacgaagcacccacacgagctcggcgttctcgtgtcgttaggccaggcgcatctcgat
ttaggccggatgcatgttactgctgcatacacggcaagggcggagagctccttcacctca
gccgttcaagttgcactgcagatgatcattgaagccagttctggcttccgccgtgttgct
tggaaaattgttgcagatgctgtgttccacctctcacagttcacacaattctcggacgag
gatcttgttcttgatgtcctctaccaattggttcctttcgtctcggatcaccctggtgag
ggtttgaccggcatcgtgacgctgcctttgtccctccagaagtcagcaaaccttccgttg
tccgcattggaaattgctgttgcagcatacaattaccggatctccttggacgcactggac
gaaacagctgtcgccagcgcgcattatgacctaagcgcggccttgttttcctactctcga
aaagcgagtgcaaagcaacaactcgcaaagcaagaagcaacgaagcacatcaaggacgct
ttgcgcgctgaacctggcaacgatcgatattggaatgctctcggaaacatggagtttgag
tcgcgacctaaaattgcgcaacatgcctacgtgaaggcactagacattaattcgaagagc
acgattacttggacaaacctgggactcctctacctacatcatggtgatacggagcttgca
aatgaagcgttctataaggcgcagacgctggatcctgactatgcattggcttgggttggc
cagggcctggttgcttctctcaacggtcatgccccggaagccagagcgctattcgagcat
gcggttggcttgagtgcacctgtgccggatgcagatgtcgagttcgccaaacgcgtcttc
agtcaactcaacactacagctcaaatacgcccgtcccaattggacgcaatatccccggcc
ttctttgttctcgatcgcttctgcagaggaagacctcatgatgcatctgctttacatcta
ttcggattagtatgcgagcgtatcgggcatatcgagttgggtatcgatataattggtcgc
gccatcgtgttgcttgaagctgcgtatgaagacacggaagatcctgttgtcgagaggcgt
ttcagcatagcacacacaaatatggcgcgtcttcgactctccgtacaagattacgaggga
gcgttggagtcttaccaagtagtgactggcctgctgccggaagattcagaggatcgcagc
gcaagaatcttgctcactcaagctcgatttggcgctggcctcgctcagtttaagctcggc
cagcttgcagaagctcttgctctttttgaagccgctctggacacggcagcggacgagcca
gacatgcgagggcatgtcatcgttatgttagctcagacgctttgggccatggggacggaa
gagggcagagagtctgcgaaggcgcagctactacaaagcatcgagtctgatcccgataac
ctgctggccatcaacacacttgcaggaatgggcattctaacggatgacgacagcctcgtc
gacgctgcactgtccgagattcttgcgcttcctcctgatcaacgcctcgctcgagacccc
gacagagaggtaacgtatctcctcgtccagcaccaccttggacagcgtcatcaaacgcag
ggcgatgtccagcaagctctatcggtgtcgcaaaaggctgtcatagttgagccttcccgc
cctgagatcaggcagacgctagccgaattggtgctccaacaaggcgacggcgaaggttcg
cttgcagtactcgcagcaacgcatcaagaatctttggctcagcaacgtgattctctatac
cttcgtgctatcgcgcgttgtgtaaatgccaagactcaggaagaagctcatcagcttgcc
cacaaagctgtcatgctcacaccatgggacaagcgcaactggcaggcacttgcttttgta
aaaagtacttag
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