Planococcus plakortidis: BBI15_01000
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Entry
BBI15_01000 CDS
T04812
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ppla
Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppla03019
]
BBI15_01000
Messenger RNA biogenesis [BR:
ppla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBI15_01000
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF7597
PBCV_P4
Motif
Other DBs
NCBI-ProteinID:
ANU18904
UniProt:
A0A1C7E4L5
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All DBs
Position
1093796..1094734
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AA seq
312 aa
AA seq
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MTKGITTRAVGETVDDFLLIKQSVKGVTTTGNPFMSLVLQDKSGDIEAKLWDTKDEHERM
YAAETIVRVGGEIHNYRGKNQLRIKSIRPAKPEENLTIAEFLPSAAQSTDQLHEEVTKFL
FEMENPQIQRITRHILKKYQQQFLTFPAATRNHHDYVSGLADHVVSMLKLGKAICEVYPS
LNKDLLYSGIILHDIGKVFELSGPVATTYTVEGNLLGHISIMVTEIAKAAEELGIEGEEV
MVLQHIVLSHHGKEEWGSPKKPMIKEAEILHYIDNIDAKMMMLDRVLGKTKEGEFSERVF
ALDNRSFYKPKL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaggaattacaacccgcgctgtcggggagacagtcgatgattttctgctgatc
aaacagtcggtcaaaggcgtcacgacgaccgggaacccgttcatgtcactcgttctgcag
gataagagcggagacatcgaggcaaagctatgggacacgaaagacgaacacgaacggatg
tatgcggcagaaacgattgtcagagtcggcggggaaatccataattaccgcggcaagaac
cagctgcgcatcaaaagcatccgtccggcaaaaccggaggaaaatttgacgatcgccgag
tttttgccttcggcggcgcaaagtacagaccaattgcacgaagaagtgacaaagttcctg
ttcgagatggaaaatcctcaaatccagcgcatcacgcgtcacatcctgaagaaataccag
cagcaattcctgaccttcccggccgccacgcgcaatcaccacgattacgtgtcgggcctt
gcggatcatgtcgtgtcaatgctcaagctcggcaaagcgatttgcgaagtgtatccgagc
ctaaataaggatttgctgtattcgggaatcatcctccatgatatcgggaaagtctttgaa
ctatcagggccggtcgcgacgacttataccgtagaaggcaatttgctcggccatatctcg
atcatggtgaccgaaatcgcaaaagcggcggaagagctcggcatcgaaggggaagaggtc
atggtccttcaacatatcgtcttgtcgcatcacggcaaggaggaatggggcagcccgaaa
aagccgatgatcaaagaggcggaaatcctccattatatcgacaatatcgatgcgaagatg
atgatgctcgaccgcgtgctcggcaagacgaaagaaggcgagttttcggaacgcgtcttc
gcgctcgacaaccgctcattctacaagccgaaactataa
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