Planococcus plakortidis: BBI15_02245
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Entry
BBI15_02245 CDS
T04812
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppla
Planococcus plakortidis
Pathway
ppla03030
DNA replication
ppla03430
Mismatch repair
ppla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBI15_02245
03430 Mismatch repair
BBI15_02245
03440 Homologous recombination
BBI15_02245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppla03032
]
BBI15_02245
03400 DNA repair and recombination proteins [BR:
ppla03400
]
BBI15_02245
Enzymes [BR:
ppla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBI15_02245
DNA replication proteins [BR:
ppla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBI15_02245
DNA repair and recombination proteins [BR:
ppla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBI15_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ANU19105
UniProt:
A0A1C7E5Z0
LinkDB
All DBs
Position
1329231..1332284
Genome browser
AA seq
1017 aa
AA seq
DB search
MVYPHIVTAADPLKSTIRLDELFAVLTEQGAGAAALVNSKLYGVLPFWDACKKAGIHGVL
GLSVPVDFDGAALPVVLYAQNNTGYQMLLKLSSALSTRDVDAIPQKWLAAYQEGLVCVIP
DHAEWVLTDRSEALGILSRLFGEGLFASIERPGGMVQETEQTFIEYCSSFGLKFMASHEC
RYVKPQDAFAYEVARSIGEGFKLSDPERRKPEHSMAFVPTQTQLSEWFSDHPEWLEQSRK
LLMDCRVTIPLNRQLLPRFPVKEGSDKSDVIRELCLKGLEQRIGKLEPSYLDRLDYELGI
ISKMGYIDYFLIVSDFMAYARNRGILTGPGRGSSAGSLVAFAMRITDVDPLAHGLLFERF
LNPERVTLPDIDIDFADHRRHEVVEYVAKKYGALQTAQIITFGTLSAKAVARDTARVFGF
EAEELEKISKLIPSRPGITLRAALRESKALEDWIVGNETRERWFKTALKLEGLPRNSSIH
AAGVILSPGPLVDYVPIEKGHDDIFITQWPMQELEAIGLLKMDFLGLRNLTILENMAHML
KRDRNLPIDYRSLPLDDKGTYSLLAKGDTAGIFQLESPGMRRALMLIKPSAFGDIVAVNA
LYRPGPMEFIPLYARRKHGEEAVAYIHPVLEPILSETYGVIVYQEQIMKIAADMAGFSLG
EADLLRRAVSKKNRQILDEERQHFVGGATAKGYTAKESGDVYDLIVRFADYGFPKSHAVA
YSMISYQLAYMKAHYPVQFYAALLSNSQGNNEKTAQFMREMKERRIPLAAPCIARSRYGF
SSEERQVRIGLSAVKGVPGTAVKAILEARKEGPFQNLFNIAERISAVHFTRKALEPLIKA
GALDVLGKDRAVLLASLDSAIKHAELVKPNEDPGLFDDMGSSFMKPKYTKADPMPDGLKL
DFEKEALGFYLSTHPVEREKEQRNKAYTALNELPKKKDRERVEVLGLVEDVRRIRTKKGD
AMAFATLQDETGVASVTLFPKEYAQYNEILDKDALLEIQGTAETRQGKTTIICKTIL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtctatccgcatattgtgacggcggctgatccgctcaagagcacgatccgcctcgat
gaactgtttgcggttctcaccgagcaaggcgctggcgcggcagctttggtcaattccaaa
ttatacggcgtcctgccattttgggacgcctgcaaaaaggccggcatccacggggtgctc
ggcctttccgtgcccgtcgactttgacggggccgcattgcctgtagtgctgtatgcacag
aacaacaccggctaccagatgttattgaagctgtcgagtgctttgtcgacccgcgatgtg
gacgccatcccgcaaaaatggctggcagcttatcaggaaggtttagtatgcgtgattcct
gatcatgcggagtgggtgctgacagaccgcagcgaagcgctcggcatcttgtcgcggttg
ttcggggagggcttgttcgccagcatcgaacggcctggggggatggtgcaggagacagaa
caaacgttcatcgagtactgctcatccttcggtctcaaattcatggcaagccacgaatgc
cgatacgtaaagccacaagatgcctttgcgtatgaagtggcaaggtcaatcggcgaaggg
ttcaagctaagtgaccctgaacgccggaagcctgaacattcaatggcattcgtcccgacg
caaacgcaattatcggagtggttttcagaccatcctgaatggcttgaacaaagccggaag
ctgctcatggactgccgggtcacgattccgttgaaccggcaattgctgccgagattcccg
gtgaaggaaggcagcgacaaaagcgacgtgatccgggagctttgcctgaagggcctggaa
caacgtatcgggaaattggaaccaagctatttggacaggctcgattatgaacttggcatc
atttcgaaaatgggctatatcgattatttcctcatcgtttccgatttcatggcttatgca
agaaacaggggcatcttgaccggccctggacgcggatcctccgccggctcgcttgtcgct
ttcgcgatgcgcatcacggatgtcgatccgctcgctcatgggttattattcgagcgtttc
ctgaatccggagcgcgtcaccttgccggatatcgatattgacttcgcggaccatcgccgc
cacgaagtcgtcgagtatgtcgcgaaaaaatacggtgccttgcagacggcacaaatcatc
acgtttggcactttgtccgcaaaagcggtcgcgagagacacggcgagggtattcgggttc
gaagccgaagaactcgagaagatatcaaagctcatcccaagccggccaggcatcactttg
cgcgcagctcttcgtgaatcgaaagcgttggaagactggattgtcggaaatgaaacacga
gagcgctggttcaagacggcactgaagctggaaggcctgccccgcaattcctcaatccat
gcagccggcgtcatcctgagtccgggcccattggtggattatgtcccgatcgaaaaaggc
catgacgatattttcatcactcaatggccgatgcaggagcttgaagcgatcggcttattg
aaaatggattttcttggattgcgcaatttgacgattctggaaaatatggcgcatatgctg
aaacgcgaccgcaatttgccgattgattaccgcagtttgccgcttgacgataaaggaacc
tatagcttattggcaaagggcgacacagcgggcattttccaactggagtcaccgggtatg
cggcgcgctttgatgctcatcaaaccgagcgcgttcggcgatattgtcgcggtcaatgcc
ttgtatcggccaggaccgatggaattcatcccgctgtatgcgcgccgcaagcatggcgaa
gaggcggtagcctatatccatccggtgctggaaccaattttatcggaaacatacggcgtc
atcgtctatcaggaacagatcatgaaaatcgccgctgacatggcgggcttcagcttaggc
gaagccgatcttttacgccgtgccgtcagcaagaaaaaccgtcagatccttgatgaagag
cgccagcatttcgtaggaggcgccaccgctaaaggctataccgcaaaagaatcgggagat
gtctatgacttgatcgtgcggtttgcagattacggcttcccgaaaagccatgcagtcgcc
tacagcatgatttcctaccaactggcttatatgaaagcccattatcccgtgcagttctat
gccgcgctgttatcgaacagccaagggaacaacgagaagacggcacagttcatgcgtgaa
atgaaagaacgcagaatcccgcttgcggcaccgtgcatcgcaaggagccgctacggtttt
tcatcggaagaacgccaggtccgcatagggctcagcgcagtgaaaggggttcccggaacg
gcagtcaaagccattctcgaggcgagaaaagaagggcctttccaaaacctgttcaatatt
gccgaacggatttcggctgtgcatttcacccgcaaggctctcgagccactcatcaaagcc
ggcgctttggacgtgctcggaaaagaccgggccgtcctgctcgcatctcttgatagtgcg
atcaagcacgcagaactggtcaaaccgaacgaagacccgggtttgttcgatgatatggga
tcgagcttcatgaaaccgaaatacacaaaagcagatccgatgccggacgggctcaagctc
gacttcgagaaagaagcactcggcttctatttgagcacccaccctgtggagcgggaaaaa
gaacagcgcaataaggcgtatacagcgctaaacgagttgccgaagaaaaaagaccgtgag
cgtgtagaagtgctcgggctggtggaagacgtacggcgcatccgcacgaaaaaaggcgat
gcgatggcgtttgccacattgcaggatgaaacaggggtcgcctcggttacgctgttcccg
aaagagtatgcgcagtacaacgaaatattggataaagacgccttgcttgaaatccaagga
acggctgaaacccgccaaggcaagacgaccatcatctgcaaaaccattttatga
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