Planococcus plakortidis: BBI15_02835
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Entry
BBI15_02835 CDS
T04812
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ppla
Planococcus plakortidis
Pathway
ppla03410
Base excision repair
ppla03430
Mismatch repair
ppla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBI15_02835
03430 Mismatch repair
BBI15_02835
03440 Homologous recombination
BBI15_02835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppla03400
]
BBI15_02835
DNA repair and recombination proteins [BR:
ppla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BBI15_02835
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBI15_02835
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BBI15_02835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ANU19216
UniProt:
A0A1C7E664
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All DBs
Position
1453256..1455598
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AA seq
780 aa
AA seq
DB search
MIESKKRWQLTSPDEQVVQSLQEALSLSSVLAKILVTRGIDTVGKAQEFLDVELSGIHNP
FLMKDMDVAVARIQQAIEAEEKILVYGDYDADGVTSTTVMMTVLQDLGADVSFKIPNRFD
HGYGPNAKLFKEAHAEGINLIVTVDNGVSGIEPVRLANELGMDVIISDHHDIGDELPEAL
AIIHPRHPEGEYPFGELAGVGVAFKIAQALYGDIPDHLTELVAIGTIADLVPLHGENRVL
VKEGLRALQDSPMPAIAALADVAGVKQRDITEETIGFMFGPRINAIGRLQSADPAVRMFM
TDDPAEARSLADGLDVLNKERQAIVKAISQQAIEQVEARYGEQLPHVIVVAQEGWNPGVV
GIVASKLTEKFYRPSIVLSLDLANDKAKGSARSIEGFHLYNELAKNRDILPHFGGHPMAA
GMTLAAEHVDELRERLNEQAKTVLTAEDLVPVVSIDIPVTLDEVSTDTIEGMRRLAPFGM
GFAKPKFYLNGVKVAGIRKIGASQAHLKMELAQNSSTLDAVGFGIGELGDELTPDVKIDV
IGDLQINEWNGRKKPQLLVEDIRTDEWQLFDIRGIRQVSRWSKLIPKQNQVFVAFQKETE
AVFRSLLDGPIVPAQSLSESGSAQDHLVLLDLPDSEEQLSSVLKQVRPKRVYAHFYAQES
HYFERIPDREQFKWLFGFVKKRGSFDFKKNGDELAKHKGWSRETLFFMLQVFFELGFVTL
NNGITEIAQAPGKRDLSEAPAYKKRERQIALEQKLLYASYRDLKDWFDAQVSAKEEELWI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatcgaaaaaaagatggcaattgacaagcccggatgaacaagtcgtgcagagc
ttgcaggaagcgctgtccttatcttccgtgctggcgaaaatcctcgtcacgcggggcatc
gatacggtcgggaaagcgcaggagtttctggatgtggagttgtccggcatacataacccg
tttctgatgaaggatatggacgtcgcagtggcgcgtatccaacaggcgattgaagcggaa
gagaaaattctcgtctacggtgattacgatgcagacggagtcaccagtacgacggtcatg
atgacggtgttgcaggatttgggtgccgatgtcagtttcaagatcccgaaccgcttcgac
catggctacggcccgaatgcgaagctgttcaaggaagcgcacgcggaaggcatcaacttg
atcgtcacggtcgataacggcgtatcaggaatcgagccggtgcgcttggcgaatgaactt
gggatggacgtcatcatcagcgaccaccacgatatcggcgatgaactccctgaagcgctc
gcgatcatccatccgcgccacccggaaggcgagtatccgtttggtgaactggctggcgta
ggcgtggccttcaagattgcccaggcgctatacggagatatcccggaccatttgaccgag
ctggtcgcgatcggcacgattgccgatttggtgccgttgcatggggagaaccgcgtgctc
gtcaaagaaggcttgcgcgccttgcaggattcgccgatgcccgcgattgcagcgctcgcg
gatgtagcgggcgtcaagcagcgcgatatcaccgaagagacaatcggcttcatgttcggc
ccgcgcatcaatgcgatcggccgtctgcaatcggcggacccggccgtacggatgttcatg
accgacgacccagcggaagcgagatcgcttgcggacggtttggacgtcttgaacaaagaa
cgccaggcaatcgtcaaggcgatttcacagcaagcgatcgaacaagtcgaggcgcgttac
ggcgagcagctgccgcatgtcatcgtcgtggcccaggaaggctggaatccaggcgtggtc
ggcatcgtcgcttcgaaattgaccgagaaattctaccgcccgtccatcgtcctgtcgctc
gatttggcaaacgacaaagcgaaaggctcggcgcgcagcatcgaaggcttccatctctat
aatgaacttgccaaaaaccgggacatcctgccgcatttcggcgggcacccgatggcagct
ggcatgacgctcgctgcagaacatgtcgatgagctgcgtgaacgtttgaacgaacaagca
aaaactgtattgaccgctgaggatttggtaccggtcgtgtcgatcgatattccggttacc
ttggatgaggtgagcacggataccatcgaaggcatgcgccgcctcgccccgttcgggatg
ggctttgccaagccgaagttttatttgaacggcgtgaaagtggcgggcatccgtaaaatc
ggtgccagccaggctcatctgaagatggagctggcgcaaaacagttccaccttagatgcg
gtcggtttcggcatcggcgagctcggcgatgaattgacgcctgatgtgaagatcgatgtc
atcggtgatttgcagattaacgaatggaacggtcgtaaaaagccgcagctattggtggag
gatatccgcacggacgaatggcaattgttcgacatccgcggcatccgccaagtgagccgc
tggtcgaagctcatcccgaaacagaaccaggtgttcgtcgcattccagaaagagaccgaa
gcggtgttccgctcgctgctcgacggcccgatcgtcccggcacaatccttgtcggagtcc
ggttctgcgcaagaccatctcgtgctattggacctgccggattcagaggagcagctgtcg
tccgtccttaagcaagtgcggccgaagcgcgtctatgcccatttctatgcacaggaatcc
cactatttcgagcgtatcccggaccgcgagcagttcaaatggctattcggtttcgtcaag
aagcgcggcagcttcgacttcaaaaagaacggtgatgaactcgccaaacataaaggctgg
agccgcgagacattatttttcatgcttcaggtgttttttgaacttggttttgttacactt
aacaatggaattaccgagattgcacaggctccgggaaaacgcgacctgtcggaagcgccg
gcttataagaagcgcgagcgtcagattgccttggaacagaagctcttgtatgcatcctat
cgggatctaaaagactggttcgacgcccaagtgtcagccaaggaggaagaattatggatt
taa
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