KEGG   Planococcus plakortidis: BBI15_04600
Entry
BBI15_04600       CDS       T04812                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
ppla  Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:ppla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppla03400]
    BBI15_04600
Enzymes [BR:ppla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     BBI15_04600
DNA repair and recombination proteins [BR:ppla03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BBI15_04600
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII Helicase_C DEDDh_C Rv2179c-like
Other DBs
NCBI-ProteinID: ANU19533
UniProt: A0A1C7E6B5
LinkDB
Position
complement(1802191..1804953)
AA seq 920 aa
MNSQKYVVVDIETTGHSPAKGDRIIQLAMVAIEQGEIVDTYTKFINPQRKIPAFIQDLTN
ITERDVEGAEPFEAYAEEIYRQLEGSIFIAHNIHFDLPFLQAELSRAGMPKWQGLAMDTV
ELSRLVYPTAFSYKLQDIAAEQGIHLKNAHRADDDALATAELFLRAKQELAALPYDTLVL
LHKRSFQLKSDLSRLLFEITQEKRNGQADRFGRFRGIPIVPKAERAQALDDSPQQTAWKK
GLEKVNPEYEQRPSQVAMMQAVERAIRERSELVIEASTGMGKTLGYLLPAAAYAKESGKQ
VVISTYTTHLQDQLVSKEVKLAEEFLGAKIQVALVKGLSHYIDLGRFFELLHGDDESYDE
TFTIMQVMVWLTSTRTGDLNELNVSSGGQLLIDKVRRSHLRKLTKLEKTVDFYEHALTQA
ERAHVIVTNHAFLLNPHNQKRAILKNVDAYIWDEAHQVVQAAVAHKEKTFVYTQWRYVFG
QLGSFDENQLFSKFYRVADSHGFGRVPDLLQMESLYMKYTSLFDEVTLYLAQAFQNKFHN
SRSRKCASLLDELDFERDRFMDFLRFLNSWIDIAQTILQKAEHYTELTMDERLVLADFRY
WTEELMLKSVEFSEIFLFPKEDEVSWIEGDLRSMPTSLSLYKRPYEVASLVNKFIGQARG
ERAVIWLSGTMSVPSNERFIVNQLGIPNHVAIDKFEPADQFYSGAKVYIVEDMPDIQHVS
QQEYIESVADAVTQTVLVTEGRCFVLFTSQDMLRKTVDLIQDSQLLDDYMLFAQGMSSGS
RMKLLKSFQRFQKSVLFGTNSFWEGVDVPGDALRAVVVVRLPFTSPEEPVFKAKSRIISK
EGINPFMHYALPEAVLRLRQGFGRLIRSKEDKGLFIVLDRRIETKSYGEEFLHALPEVPV
AKVSLEKMVTDIEHWYNRQG
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgaattcccaaaaatatgtcgttgtcgatatcgaaacaacgggccattcccctgcaaaa
ggtgaccggatcatccaattggcgatggtggcgatcgaacaaggagaaatcgttgataca
tatacgaaattcatcaatccgcagcgaaaaattccggcgttcatacaggatttgaccaat
atcacggagcgtgacgtggaaggggcggagcctttcgaagcgtacgcagaggagatttac
aggcaattggaaggatccattttcattgcccataacatccacttcgatttgccgtttctt
caagcggaactaagccgcgccggcatgccgaaatggcaggggctggcaatggatacagtg
gagctttcacgcctcgtctatccgactgccttcagctataaattgcaggacatagcggca
gaacaaggcatccatttgaaaaatgcgcatcgcgcagatgacgatgccttggcgactgct
gaattgtttttgcgtgcaaaacaggaactggccgcacttccttatgatacattggtcctt
ttgcataagcggtctttccaattgaaatcggacctgtcgcgcctgctgtttgagatcacg
caggaaaaacgcaatgggcaagctgaccggttcggccgtttccggggcatcccgatcgtc
ccgaaagccgagcgggcgcaagccctggatgattcaccgcaacaaaccgcttggaaaaaa
ggcttggagaaggtcaatccggaatacgaacagcggccgagccaagtcgcgatgatgcaa
gcggtggagcgtgcgatccgcgagcgcagcgaattggtgatcgaagcatcgacaggaatg
ggcaagacgctcggctacctgttgccggcagcggcctatgccaaagaatccggcaagcaa
gtggtcatcagtacgtatacgacccatctgcaggatcagctcgtctcgaaagaggtcaag
ctcgcggaagaatttctcggagctaaaatccaagtggcgctcgtcaaagggctgtcgcat
tatatcgatttgggccgctttttcgagctgctccacggggatgatgagtcttacgatgaa
acgttcacgattatgcaagtcatggtctggctgacatcgacacggaccggcgacttaaac
gaattgaatgtgtcgagcggcgggcaattgctcatcgacaaagtgaggcgttcgcattta
aggaaattgaccaagctggaaaagaccgtcgatttctatgaacacgcattgacacaagct
gaacgtgcccatgtcatcgtgaccaaccatgcattcttattgaacccccataaccaaaaa
cgggccatattgaaaaacgtggacgcttatatatgggatgaagcgcatcaagtcgtgcag
gcggcggtagcccataaagaaaaaactttcgtctatacacaatggcgctatgtgttcggc
cagctgggaagtttcgatgagaaccagctgttttcgaaattctaccgggttgccgactct
cacggctttggcagagtacccgatcttctgcagatggaatccttatatatgaaatacacc
agtctattcgatgaagtgacgctttatctggcacaggccttccagaataaattccataac
agccgctcccggaaatgcgcgtccctattggatgagttggattttgaacgggaccgcttc
atggatttcctgagattcttgaatagctggatcgacatcgcgcagaccatcctgcaaaaa
gcggaacattatacggaactgacgatggatgaacggctggtgcttgcggatttccggtat
tggactgaggaattgatgctgaaatcggtggagttcagtgagatcttcctgttcccgaaa
gaagatgaagtgtcctggatcgaaggtgatttgcgcagcatgccaacgagcctatcactc
tataaacggccctatgaagtcgcctcgcttgtcaataaattcatcggccaggcgagaggc
gaacgagcggtcatctggctatcgggcacgatgagcgtcccatcgaatgaacgctttatc
gtcaatcagctcggcataccgaatcatgtggcgatcgataagttcgaacctgccgatcaa
ttctacagtggcgcaaaagtgtatattgtcgaggacatgccggatatccagcatgtgtcc
cagcaggaatacatcgaatccgtggcggatgcggtcacccagacggtgctcgttaccgaa
gggcgttgttttgtgttgttcacttcacaggacatgctcaggaaaacggtcgatttgata
caggactcccaacttctcgatgattatatgctgtttgcgcaaggcatgtcttcaggcagc
cgcatgaaattattgaaatcgttccagcgattccagaaatcggtattgttcgggacgaat
agtttctgggaaggcgtcgatgtgccgggcgatgcgctgcgcgcggtcgtcgtcgtaagg
ctgcctttcacttctccagaagagccggtgttcaaagcgaaatcgcggatcatctccaag
gaaggcatcaatccgttcatgcattatgccttgcctgaagcggtgctgcgcctgcgccag
ggattcggccgcctgatccgctcgaaagaggacaaaggcttgttcatcgtgctggaccgc
cggatcgaaaccaaatcatacggggaggaattcctgcatgccctgcctgaggtgccggtc
gccaaagtgtctttggaaaagatggtaaccgatattgaacattggtataataggcaagga
taa

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