KEGG   Planococcus plakortidis: BBI15_04745
Entry
BBI15_04745       CDS       T04812                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ppla  Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:ppla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppla03032]
    BBI15_04745
   03036 Chromosome and associated proteins [BR:ppla03036]
    BBI15_04745
   03400 DNA repair and recombination proteins [BR:ppla03400]
    BBI15_04745
DNA replication proteins [BR:ppla03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BBI15_04745
Chromosome and associated proteins [BR:ppla03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BBI15_04745
DNA repair and recombination proteins [BR:ppla03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BBI15_04745
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_2 Rpf1_C SIS_2
Other DBs
NCBI-ProteinID: ANU19558
UniProt: A0A1C7E764
LinkDB
Position
complement(1827689..1827961)
AA seq 90 aa
MNKTELVNSVAEAAELSRKDAAKAVDAAFEAIQDALTKGEKVQLIGFGNFEVRERAARKG
RNPQTGAEIEIAASKVPAFKPGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattagtgaactctgttgcagaagcggctgaactttctcgtaaagat
gctgcgaaagcagttgacgctgcatttgaggcgattcaagatgctctaactaaaggtgaa
aaagtacaattgatcggattcggtaactttgaagttcgtgagcgcgcggcccgtaaagga
cgcaacccacagacaggtgctgaaatcgagattgccgctagcaaggttcctgcctttaag
ccaggtaaagcacttaaagacgcagtgaaataa

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