Planococcus plakortidis: BBI15_05155
Help
Entry
BBI15_05155 CDS
T04812
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppla
Planococcus plakortidis
Pathway
ppla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBI15_05155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppla03019
]
BBI15_05155
03016 Transfer RNA biogenesis [BR:
ppla03016
]
BBI15_05155
Enzymes [BR:
ppla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BBI15_05155
Messenger RNA biogenesis [BR:
ppla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBI15_05155
Transfer RNA biogenesis [BR:
ppla03016
]
Prokaryotic type
tRNA degradation factors
BBI15_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
OB_RRP5_4th
S1_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ANU19634
UniProt:
A0A1C7E6P0
LinkDB
All DBs
Position
complement(1910062..1912170)
Genome browser
AA seq
702 aa
AA seq
DB search
MEQTKKVYTFDWAGRELKVEVGQLAKQANGAALIRYGDTAVLSTATASKSPKPLDFFPLT
VNYEERQYAVGKIPGGFIKREGRPSEKATLISRLIDRPLRPLFPDGFRNEVQVISMVMSV
DQDCPSEMAAMFGSSLSLMISDIPFDGPIAGVIVGMVDGEYIINPTGEQMEKSSINLTVA
GTKDAINMVEAGAKEVSEEAILEAIMFGHEEIKKLIAFQEEIAAEVGKEKAAVQLYELDA
DLTSELKTAVEEDMNAAVQVNEKQARNEAIAAVRERALEAYADSEDDIKKQAGQVLDKMV
KDEVRRLITDEKIRPDGRGPSEIRALSSEVGVLARTHGSGLFTRGQTQAMSICTLGALGD
VQIIDGLGLEETKRFMHHYNFPLFSVGETGFLRGPGRREIGHGALGERALEAVIPNEKDF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKKGENYTVLSDI
QGMEDHLGDMDFKVAGTAEGVTALQMDIKIDGLSREILEEALTQAKIGRLHILESMIATI
NAPRTTLSKFAPKIIMVKINPDKIRDVIGPGGKVINKIIDETGVKIDTEQDGTIFISSVD
EEMNAKAKAMIENIVREAKVGEYYEGAVKRIEKFGAFVELFPGKDGLLHISEIQEERTKE
VEDVLKMGDIVKVKVIEIDRQGRVNLSRKTVLKEEKEAAEKA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacaaaaaaggtttacacatttgactgggccggccgcgaactgaaggttgaa
gtcggtcaactggcaaaacaagcaaacggagcggcattgatccgttatggcgatacagcc
gtgctatccactgccacggcatcgaaatcaccgaagcctctggatttcttcccgctgacg
gtgaattatgaagagcgccaatacgctgtcgggaaaatcccgggtggcttcatcaagcgc
gaagggcgcccatccgagaaagcgaccttgatcagccgcttgatcgaccgcccgctgcgc
ccgctattcccggacggtttccgcaatgaagtacaggtcatttctatggtcatgtccgtc
gaccaggattgcccgtctgaaatggcagcgatgttcggttcttctttatctttgatgatt
tcagacatcccatttgacgggccgatcgccggcgtcatcgtcggaatggtggatggcgag
tacatcatcaacccgacaggcgagcaaatggaaaaaagctccatcaacttgacggttgcc
ggcacgaaagatgccatcaacatggtagaagccggcgcgaaagaagtgtctgaagaggcc
attctggaagccatcatgttcggccacgaagaaatcaagaaattgatcgctttccaggaa
gaaattgcagcggaagtaggcaaagagaaagcggcggtccaactatacgaattggatgct
gacttgacgtccgaattgaaaacggcggttgaagaagacatgaatgccgcagtccaagtg
aacgagaagcaggcacgcaacgaagccatcgcagctgtgcgtgaacgtgcactcgaagct
tacgcagattcagaagacgatattaaaaaacaagcgggccaagtgctcgataaaatggtc
aaagatgaagtccgccgcttgatcacggatgaaaaaatccgcccggacggccgcggccca
tccgaaatccgagcgctttcttctgaagtcggcgtccttgcacgcactcacggctcggga
ctcttcacgcgcggccagacacaagcgatgagcatctgtacactcggcgcactcggcgat
gtacagatcatcgacggcctcggattggaagagacgaaacgctttatgcatcattataat
ttcccattgttctccgttggggaaaccggcttcctgcgcggccccggccgccgcgaaatc
ggccacggggctctaggcgaacgagcgcttgaagcggtcattccaaatgaaaaagatttc
ccttatacgatccgcctcgtttccgaagtgttggaatcgaacggttcgacttcacaggca
agtatctgcgcttccactttggcgatgatggatgcgggtgtgccgattaaagcaccagta
gccggaattgcaatgggccttgtgaaaaaaggcgagaactataccgtcctttccgatatc
caagggatggaagaccatctcggcgatatggactttaaagtagcgggaaccgcagaaggc
gtcacagcccttcaaatggacatcaaaatcgatggcttgtcgcgcgaaatcttagaagaa
gcattgacgcaagcgaaaatcggccgccttcatattttggaatcgatgattgccacgatc
aacgcgccgcgcacgaccttgtccaaattcgcgccgaagatcatcatggtgaaaatcaat
ccagacaagatccgcgacgtcattggaccgggtggaaaagttatcaataaaatcatcgat
gaaacaggcgtcaagatcgacaccgaacaagacggcacgattttcatctcttccgttgat
gaagaaatgaacgccaaagcgaaagcgatgatcgagaatattgtacgcgaagcgaaagtc
ggcgaatactacgaaggcgcagtcaagcgcatcgagaaattcggcgcattcgttgagttg
ttcccagggaaagatgggcttctccacatttcggaaatccaggaagaacggacgaaggaa
gtggaagacgttctgaagatgggcgatatcgtcaaagtgaaagtcatcgagatcgaccgc
cagggacgcgtcaacttgtcccgtaaaacagtattgaaagaagaaaaagaagcagctgaa
aaagcttga
DBGET
integrated database retrieval system
