Planococcus plakortidis: BBI15_05170
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Entry
BBI15_05170 CDS
T04812
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppla
Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppla03016
]
BBI15_05170
Enzymes [BR:
ppla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBI15_05170
Transfer RNA biogenesis [BR:
ppla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBI15_05170
Prokaryotic type
BBI15_05170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ANU19637
UniProt:
A0A1C7E857
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All DBs
Position
complement(1913657..1914586)
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AA seq
309 aa
AA seq
DB search
MEPNGILPLWKEPGMTSHDCVFRLRKILRTKKVGHTGTLDPQVDGVLPICLGRSTKVAEY
ITDQGKTYEAEVLIGASTETEDAEGAVVEQDLSDKMITRKQLEEVLQSLTGDIEQIPPMY
SAVKVNGRKLYEYARKGESVERPVRTVHIDSIELLDEADTWEGQNIRFRIRIRCGKGTYI
RTLAVQIGEALGYPAHMSQLTRTQSGSFTKEQCVTLAEVEEIAQNGDIGSILQPLAYGLS
AFPFEEITPDLLFGIKNGQVLEAHPVLKTEPFVVFTYHGKPAALYKRHPEKPGKMKPEKM
FGFPPTDEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaatgggatccttccattatggaaagaaccgggcatgacatcgcatgattgc
gtttttcgcctgagaaaaatcctgagaacaaaaaaagtcgggcataccggaacactcgat
ccgcaagtggacggcgtgttgccgatttgtttgggacggtcgaccaaggtggcagaatat
atcacggatcaagggaaaacttacgaagcggaagtgttgatcggagcttcaacggaaaca
gaagatgcagaaggcgcggtagtggaacaagacctgagcgacaaaatgattacacgcaag
cagctagaagaggtattgcaaagcctgaccggcgacattgaacaaatcccgccgatgtat
tcagcggtcaaagtgaacggcagaaagctgtatgaatatgcgcgcaaaggcgaatcagtg
gagcgccctgtacgcacggtgcatattgattctatcgaattattggatgaggcggacaca
tgggaagggcagaatattcgtttccgcatccgcatccgctgcggcaaagggacctatatc
cgaacacttgccgtccagatcggcgaagcgcttggatatccggcccatatgtcacagctg
acgcgcacacagtccggcagttttacgaaagaacaatgtgtgacgcttgccgaagtggag
gaaattgcgcaaaatggggatatcggttctattttgcagcctctcgcatacggcttaagt
gcatttccttttgaagaaatcacgccggatctactgttcggcatcaaaaatggccaagtg
ctcgaggcgcatccggtcttgaagacagaaccgtttgtcgttttcacttatcatggcaaa
ccggcagcattgtacaaacggcatcccgagaagccgggtaaaatgaaacccgaaaaaatg
tttggatttcctccaacggacgaggtgtag
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