Planococcus plakortidis: BBI15_05210
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Entry
BBI15_05210 CDS
T04812
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ppla
Planococcus plakortidis
Pathway
ppla03030
DNA replication
ppla03430
Mismatch repair
ppla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBI15_05210 (polC)
03430 Mismatch repair
BBI15_05210 (polC)
03440 Homologous recombination
BBI15_05210 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppla03032
]
BBI15_05210 (polC)
03400 DNA repair and recombination proteins [BR:
ppla03400
]
BBI15_05210 (polC)
Enzymes [BR:
ppla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBI15_05210 (polC)
DNA replication proteins [BR:
ppla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBI15_05210 (polC)
DNA repair and recombination proteins [BR:
ppla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBI15_05210 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
HHH_3
DEDDh_C
DNA_polI_exo1
T2SSK
NUP50
Motif
Other DBs
NCBI-ProteinID:
ANU19645
UniProt:
A0A1C7E7I4
LinkDB
All DBs
Position
complement(1920009..1924316)
Genome browser
AA seq
1435 aa
AA seq
DB search
MINEQDAKMRFKLLLQHLELTDDVHMPYFEGAELTRMTVHKKDRAWRFIVKLKQVLPLEL
FITFRERLHTKFSSIASVQIYIETPAQQTDGDQVAAYWRHVVDELADMAPPLRERLLAQA
PVWNGNKLIVDCCHEHEMMALKSKYTEKLGQVFQQFGFPAFSIDFQLSAEDQQEARAAFM
EERKAEEEAMAKRAVADMKKRETERKENGAPSGPFQMGAAIKPDEPIVEIRSIVDEERRV
TIEGFVFDVEVRELRSGRSLLTVKMTDYTDSILVKMFSRDKEDAELMAQAKKGMWLRARG
SIQTDTFVRDLVMMSNDMVEINPAVRKDTAEVKRAELHLHTPMSQMDAVSSVESLVAQAA
KWGHPAIAVTDHAGVQAFPDAYAASQKHGIKAIFGLEANLVDDGVPIAYEERHALLEEET
FVVFDLETTGLSAVYDTIIELAAVKIKGGQIIDKFERFANPHHPLSATTIDLTGITDDMV
RNAPEVEEVIREYHEWAGDHIMVAHNASFDMGFLYVAYKKYGIDKTHATIDTLELARMLH
PEMKNHRLNTLAKKFNIELTQHHRAIYDTEATAYLLTHLLKEADDKGILYHDQLNDYVGT
GDSYKRSRPTHCTLLAKDQEGLKNLFKLVSASHINYFYRVPRIPRSLLQRHRKGLLVGSG
CDKGEVFEAVMQKSMEEVERTAQFYDYLEVHPKEVYQPLIDREMIRDEWNLEDIIRKLVK
VSRKLDKPLVATGNVHYLDETDAIFRQVLIGSQGGANPLNRSTLPKVHFRTTNEMLDAFD
FLGEETAREIVVDNSLKVADMIDVVKPIKDELYTPKIEGADEEVRELSYTMARSIYGDEL
PEIVEARIEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSLVATLTEITE
VNPLPPHYVCRKCKKSEFFDDGSVGSGFDLKDKDCPDCGIPYKKDGQDIPFETFLGFKGD
KVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVRGYANDRDMTIR
GAEIDRLVQGCSGVKRSTGQHPGGIIVVPDYMDIYDFSPIQFPADAQDSEWKTTHFDFHS
IHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFAGPESLGVTKEQIGCK
TGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNGTCQLSDV
IGCRDDIMVYLIYQGLESSLAFKIMESVRKGKGLTPEMEAAMKEKAVPNWYIESCKKIKY
MFPKAHAAAYVLMAVRIAYFKVHFPVLYYAAYFTVRAEDFDVNAMAKGSQSIRAKVDEIN
SKGLEASTKEKNLLTVMELALEMVERGYSFQKVDLYKSSADEFLIEGNTLIPPFNAIPGL
GTNAAKSIVAARAEGEFLSKEDLQQRGRVSKTIIEYMDDHGCLEGMPDANQLSLF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgagcaagacgccaaaatgagatttaaattgctgctgcagcatctggagcta
accgatgatgtacatatgccatattttgaaggggcggaattgacgcgtatgacggtccat
aaaaaagaccgggcatggcgctttatcgtcaaactcaagcaagtgttgccgttggaatta
ttcattacgttccgcgaacgcctgcacaccaagttttcttcgattgcaagcgttcaaata
tatatcgaaacgcccgcgcaacaaacagacggggatcaagttgccgcttattggcggcat
gtcgtcgacgaattggcggatatggccccgccgttaagggaacggctattggctcaagcg
cctgtgtggaatggcaataaattgatcgtcgactgctgccatgaacatgaaatgatggct
ttgaagtcgaagtacacggagaagctgggacaggttttccagcaattcgggttcccggcg
ttttcaatcgattttcagctatcggctgaagaccagcaggaagcgcgcgccgcattcatg
gaagaacgcaaagccgaagaggaagcgatggccaaaagggctgtcgcggatatgaagaaa
cgcgagaccgaacgcaaagaaaatggcgcgccatcaggaccgttccagatgggtgccgcc
atcaagccggatgagccgattgtcgaaatccgttcgatcgtcgacgaagaacgccgcgtg
acgatcgaaggcttcgttttcgatgtcgaagtccgcgagctgcgcagcggccgttcatta
ttgaccgtcaagatgacagattacacggattcgattctcgtcaaaatgttctcgcgcgac
aaagaagacgccgagctcatggcccaggcgaaaaaaggcatgtggctgagagcgagaggc
tccatccaaaccgatacattcgtcagggatctcgtcatgatgtcgaatgacatggtcgaa
atcaatcctgctgtacgcaaggataccgccgaagtcaaacgggcggaattgcatctgcac
acgccgatgagccagatggacgctgtgtcttctgtcgagtccttggtcgcccaagcggcg
aaatgggggcatccggccattgcggtgacagaccatgcaggcgtccaggcatttccggac
gcatatgccgcaagccaaaagcacgggatcaaggcgatattcggactggaagcgaatttg
gtcgatgacggcgtaccgattgcctacgaagaacgccatgccttgctcgaagaagaaact
ttcgtcgtctttgacttggagacgaccggactatctgccgtttacgacacgatcatcgaa
ctggcagcggtcaagatcaagggcggccagatcatcgataaattcgagcgtttcgccaac
ccgcaccatcctttgtcggcgacgacgatcgacttgacgggcatcacggatgatatggtc
cggaacgcgcccgaagtcgaggaggtcatccgtgaataccacgaatgggcaggcgaccac
atcatggtcgcccataacgcatcattcgatatgggcttcctgtatgttgcctacaagaaa
tacggcatcgataaaacgcatgccacgatcgatacattggaacttgcccgcatgcttcac
ccggaaatgaaaaaccaccggttgaatacgctggcgaaaaaattcaatatcgaattgacg
cagcatcaccgcgctatttacgatacggaagcaaccgcgtatcttttgacgcatctactg
aaagaagcggacgataaaggcatcctttaccacgatcaattgaatgattacgtcgggacg
ggggattcctataaacgttcacgaccgacgcattgcacgcttttggcaaaagaccaggaa
ggcttgaaaaacctgttcaagctcgtttcagcttcgcatatcaattatttctaccgcgtc
ccgcgcatcccgcgttcgctgcttcaacgccaccgtaaaggcctgctcgtcggttcgggc
tgcgataaaggcgaagttttcgaagcggtcatgcaaaaatcgatggaagaagtggagcgc
accgcacagttctatgattatttggaagtgcatcccaaggaagtgtatcaacccttgatc
gaccgggaaatgatccgtgatgaatggaacttggaagacatcatccgcaagctggtcaaa
gtgagccgcaagctcgacaagccgttggtcgcgacggggaatgtccattaccttgatgaa
acggatgccatcttccgtcaagtgctgatcggttcgcaaggcggtgcgaacccgctgaac
cgttcgacattgccgaaagtgcatttccggacgaccaatgaaatgctcgatgcgttcgat
tttctcggggaagagacagcgcgtgagatcgttgtcgataattcccttaaggttgcggat
atgatcgatgtcgtcaagccgatcaaagatgaattgtacacgccgaaaattgaaggcgcg
gacgaggaggtccgtgaactcagctatacgatggcgcgttcgatttacggggatgagttg
ccggaaatcgttgaggcacggatcgagaaggaattgaagtcgatcatcggccatggcttt
gcggtcatctatttgatatcgcataaactggtgaaaaaatcccttgatgatggctatctc
gtcggttcgcgcggatctgtcggatcctcgcttgtcgctacgctgaccgagatcacggaa
gtcaacccgctgccgcctcattatgtgtgccggaaatgcaagaaatccgaattcttcgat
gacggctctgtcggttccggttttgacttgaaagataaggattgcccggattgcgggatt
ccgtataaaaaagacgggcaggacatcccgtttgaaaccttccttggatttaaaggcgat
aaagtacccgatatcgatttgaacttcagtggcgaataccagccgcaagcgcataattac
acgaaagtgctgttcggcgaagacaatgtctaccgggcaggcacgatcggcaccgtagcc
gagaaaacggcgtatgggtacgtgcgcggatacgccaatgaccgggatatgaccatacgc
ggcgcggaaatcgaccgcttggtgcagggctgttccggcgtcaagcgcagcacggggcag
cacccgggcgggatcatcgttgtgccggattatatggacatctatgatttctcgccgatc
cagttccctgcggacgcacaggattccgaatggaagacgacgcatttcgacttccactcg
atccatgataatttactgaagcttgatattctcgggcacgatgacccgacggtgatccgc
atgctgcaggatctgtccggcattgacccgaaaacgatcccgacggatgacccggaagtg
atgaagattttcgcagggcctgaatcgctcggcgtcacgaaagagcagatcggctgcaaa
accgggacgcttggcattccggagttcgggacgcgtttcgtccgccaaatgctcgaagat
acgaaaccgacgacgttttcggaactcgtgcagatttccggattgtcacacggtacggat
gtgtggctcggcaatgcccaggaattgatccacaatggcacatgccagctgtcggacgtc
atcggttgccgggatgatatcatggtctacttgatctatcaggggcttgaatcatcacta
gcgttcaagatcatggaatcggtacggaaagggaaaggcttgacgccggagatggaagcg
gcgatgaaagagaaagccgtaccgaactggtatatcgaatcctgcaaaaagatcaagtac
atgttcccgaaagcgcacgctgccgcttatgtattgatggcggtgcgcatcgcttacttc
aaagtgcattttccggtcctttattacgcagcatatttcacggtacgggcagaagatttc
gatgtcaatgccatggcgaaagggtcccagtcgatccgtgccaaagtggatgaaatcaat
tccaaaggactggaagcctcgacgaaagaaaagaacttgctgacggtcatggagctggcg
ctagagatggtcgagcgcggctattcattccagaaagtcgatttgtataaatcttccgca
gatgaattcctgatcgaaggcaataccttgattccgccgttcaacgccattccagggctt
ggcacgaacgctgcgaagtcgatcgtcgcagcgagagcggaaggcgagttcctgtcgaag
gaagatttgcagcagcgcggccgcgtttcaaaaacgatcatcgagtacatggatgaccac
ggttgcctggaagggatgcctgatgccaatcagctgtccttgttctag
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integrated database retrieval system
