Planococcus plakortidis: BBI15_05285
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Entry
BBI15_05285 CDS
T04812
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppla
Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppla03032
]
BBI15_05285
03400 DNA repair and recombination proteins [BR:
ppla03400
]
BBI15_05285
Enzymes [BR:
ppla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BBI15_05285
DNA replication proteins [BR:
ppla03032
]
Prokaryotic type
DNA Topoisomerases
BBI15_05285
DNA repair and recombination proteins [BR:
ppla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBI15_05285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF2996
Motif
Other DBs
NCBI-ProteinID:
ANU19660
UniProt:
A0A1C7E728
LinkDB
All DBs
Position
complement(1939167..1941236)
Genome browser
AA seq
689 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASLGHLRDLPRSQMGVDVENNYEPRYITIRGK
GPILQDLKKEAKKAKKVFLAADPDREGEAIAWHLANALGVDVDSDCRVVFNEITKDAVKG
AFKHPRKLDMDLVDAQQARRILDRLVGYSISPILWKKVKKGLSAGRVQSVALGLIIDREN
EIKNFEPEEYWSITGEFEKAKKTFEAQFYGTSEKKLKLSNEEDVKDILATIKGKDFLVKS
VVKKERKRNPSPSFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGISVGKEGVTGLITYMR
TDSTRISDSAKQDTIGYILDKYGEEYVTQKPAAKQSQKSQDAHEAVRPTSVHRTPESLKS
ILSRDLYRLYKLIWDRFVASQMSPAVLDTVMAELQNGEAIFRANGSQVKFPGFMKLYIEG
TDDKKEEKDNILPEMEEGDKVKATEITPNQHFTQPPPRYTEARLVRTLEELGIGRPSTYA
PTLDTIQKRGYVALDAKRFIPTELGEIVHQLVRDFFPDILNIEFTAKMENDLDSIEESEV
DWRAIIDAFYKEFAKDLEVAENEMEKVQIKDEPAGEDCEECGSPMVFKLGRYGKFMACSN
FPECRNTKAIVKHIGVKCPTCKEGEIVERKSKKRRVFYGCERYPECEFVSWDKPIERPCP
KCSSLMVEKKVKKGVQINCTACDYKEEVQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggattatttggtgattgtcgaatcgcccgcaaaggcgaagacaattgaacggtat
ttgggaaaaaagtataaagtgaaagcctctctcggccatttgcgtgatttgccgcgcagc
cagatgggggtagatgtcgaaaataattacgagccccgctatatcacgattcgcggaaaa
ggcccgattttgcaagatttgaagaaagaagcgaaaaaagcgaaaaaagtctttctcgcg
gctgaccccgatagagaaggtgaagcgattgcctggcatttggcgaatgcgctcggtgtg
gatgtcgattccgattgccgcgtcgtattcaatgaaattacgaaagatgctgtaaaaggc
gccttcaaacatccacgcaaactggatatggatttggtcgatgcccagcaggcgcggcgt
atcctagaccgtcttgtcggttacagcatcagcccaatcctatggaaaaaagtgaaaaaa
ggcttgtcagccggacgcgtccaatcggttgcgctcggcctcatcatcgaccgcgagaac
gaaattaagaacttcgagccggaagagtattggtcaattaccggagagttcgaaaaagcg
aagaaaacattcgaagcccagttttacgggacttcggaaaagaaactgaagctttccaac
gaagaagatgtcaaagacattttggctacgataaaaggcaaggatttcctcgtcaagagc
gttgtgaaaaaggaacgcaaacgcaatccttccccttccttcactacgtcctcactccag
caggaagccgcacgcaaactgaatttccgtgccaagaagacgatgatgctcgcccagcag
ctctatgaagggatttcggtcggcaaagaaggcgtgaccggtttgattacgtatatgcgt
acggattccacgcgcatttccgactcggccaagcaagacaccatcggttacatccttgat
aaatacggcgaagaatatgtaacgcaaaaacctgcagccaagcaatcccaaaaatcgcag
gatgcacacgaagctgtccgcccgaccagtgtccaccgcacgcccgaatcgctgaaaagt
atcctgtcgcgcgatctttaccgcttgtataagctgatctgggaccgcttcgtagcaagc
cagatgtcgccagcggtactggatacggtaatggcagagctgcaaaacggcgaagcgatt
ttccgtgccaacggttcacaagtgaagtttccgggtttcatgaagctatacattgaaggg
accgacgacaagaaagaagaaaaagacaatatccttcctgaaatggaggaaggcgacaaa
gtcaaggcgaccgagatcacgccgaaccagcatttcacacagccgcctccgcgctatacg
gaagcacgcctggtgcggacgctagaagagctcggcataggccgcccgtcgacttatgcg
ccgactttggataccatccaaaaacgcgggtatgtcgcacttgatgccaagcggttcatc
ccgacagagcttggggaaatcgtccatcaattggtgcgtgatttcttcccggatattttg
aacatcgagtttaccgcgaaaatggaaaacgatttggatagcatcgaagaaagtgaagtc
gattggcgtgccatcatcgatgccttctataaagagttcgccaaggaccttgaagtggcg
gagaacgagatggagaaagtccagatcaaagatgagccggcaggcgaggattgcgaggaa
tgcggttcgccgatggtgttcaagctagggcgctacggcaagttcatggcttgcagcaat
ttcccggaatgccgcaatacgaaagcgatcgtcaagcatatcggcgtcaaatgcccgaca
tgtaaagaaggcgagatcgtcgaacgaaaaagcaagaagcggcgcgtgttctatggctgc
gaacgctatcccgaatgtgaattcgtctcttgggacaagccgatcgaacgcccctgcccg
aaatgcagcagcttgatggtcgaaaagaaagtgaaaaaaggcgtgcagatcaattgcaca
gcgtgcgactacaaagaagaagttcaataa
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