Planococcus plakortidis: BBI15_06040
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Entry
BBI15_06040 CDS
T04812
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
ppla
Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppla03021
]
BBI15_06040
Transcription machinery [BR:
ppla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI15_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
APAF1_C
Motif
Other DBs
NCBI-ProteinID:
ANU19802
UniProt:
A0A1C7E8P9
LinkDB
All DBs
Position
complement(2085345..2086091)
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AA seq
248 aa
AA seq
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MLLTALGGLFGYGVERPAETLVKLAQQGDEEAEEQLISSHIPFVKKTAAQVCKRFIDDNQ
DEYSIALLAFHEAIRQYRPGHDASFLTFAHMVIRRRVIDHIRKESKRLEFSHDFMASPNE
DHHNHIGDRASADFHTEQERAGKRREEIIQFEEMLSAFGLSFQVIAKVSPAHEDARRNAI
QIAQLVAETAEYKQYLLDKKKLPVKDIEELVQVSRKTIERNRKYIIAMALLMMSDLHYLK
DYLKERLN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctattgactgctttgggcggtttgtttggatatggcgtggaaaggcctgctgagaca
ttagtcaagctcgcacaacaaggcgatgaagaggccgaagaacaattgatctcttcacat
atcccattcgtgaaaaaaaccgccgcacaagtatgcaaacggttcatcgatgataaccag
gatgaatacagcattgcactcttggcctttcatgaggcgatacgccaataccgtccggga
catgatgcgtcgtttttgacgtttgcgcatatggtcatccggcggagagtgatcgaccat
atccggaaagaaagcaaacggctagaattcagccatgatttcatggcttcgccgaatgaa
gatcaccataatcatatcggcgaccgagcgtcggccgatttccataccgaacaagagcgg
gccggcaagcggcgtgaagagattatccaattcgaggaaatgctctcagcttttggctta
tccttccaagtgatcgccaaagtttcccctgcccatgaagatgccaggcgaaacgccatc
caaatcgcacaattggtggcggaaacggctgaatacaaacagtacttgctcgataagaaa
aaacttccggtcaaggatatcgaggaacttgtccaggtctcgagaaaaaccattgagaga
aaccggaaatacataatcgcaatggcgctattgatgatgagcgatttgcattacctaaaa
gattatttgaaggagcggttgaactga
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