Planococcus plakortidis: BBI15_12930
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Entry
BBI15_12930 CDS
T04812
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppla
Planococcus plakortidis
Pathway
ppla02020
Two-component system
ppla02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBI15_12930
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBI15_12930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppla03021
]
BBI15_12930
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppla02035
]
BBI15_12930
Transcription machinery [BR:
ppla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI15_12930
Bacterial motility proteins [BR:
ppla02035
]
Flagellar system
Flagellar assembly proteins
Stator
BBI15_12930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_5
HTH_24
HTH_23
Rv2175c_wHTH
HTH_IclR
CT_C_D
Sigma70_ECF
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU21022
UniProt:
A0A1C7EC96
LinkDB
All DBs
Position
236430..237188
Genome browser
AA seq
252 aa
AA seq
DB search
MVNQKLSNAELAQWGNWQQNRDQDAGDYLVAKYLPLVDYVIQRFLISLPKTVDKDEVRSY
AYEGLLDALDKFKPEKDWKFETYAGWRIKGAIIDGLRKSDWLPRSLRDKVKKIEKAYAEL
EQQKGESASDQEVSEYLGMTPAELNRAVSEAALSAMLSMDDDQANLEERMPRATIGSPER
ELSGQMTKEALAKAIATLPEKEKLTVSLCYFEEMKLTEIAEILGLSVSRVSQLHSKAMLR
LHAAMLSVHEHY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaatcagaaattgtcgaatgcagaactggcgcaatggggcaactggcagcagaac
agggaccaggatgccggcgattatttagtcgcgaagtatttgcccctggtggattatgtg
attcaacgctttcttatcagcctgccgaaaactgtcgacaaagacgaagtccgaagctac
gcctatgaaggcttgctggacgcactcgataaattcaagccggaaaaagactggaaattc
gaaacttatgccgggtggcggatcaaaggggcaatcatcgacggcctccggaaaagcgat
tggctgccccgttcattgcgggacaaagtgaagaaaatcgaaaaagcgtacgccgaattg
gagcagcagaaaggcgaaagtgccagtgaccaggaagtgagcgaatacttggggatgacc
ccggcagaattgaaccgcgccgtctcggaagcggccctatcggcaatgctgtcgatggat
gacgaccaggcgaacctggaagaacgcatgccacgcgccactattggttcgccggaacgc
gagctgtccgggcagatgaccaaagaggcgttagcgaaagccattgccacattgccggaa
aaagagaaattgacggtttcgttatgttattttgaagagatgaagctgaccgaaatcgcg
gagattctcggtctcagcgtgtcgagggtgtcgcagctgcattcgaaagcgatgctgcgg
ctgcacgcagcgatgctatcggtccatgaacattattaa
DBGET
integrated database retrieval system