KEGG   Planococcus plakortidis: BBI15_12930
Entry
BBI15_12930       CDS       T04812                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ppla  Planococcus plakortidis
Pathway
ppla02020  Two-component system
ppla02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ppla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BBI15_12930
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BBI15_12930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppla03021]
    BBI15_12930
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ppla02035]
    BBI15_12930
Transcription machinery [BR:ppla03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BBI15_12930
Bacterial motility proteins [BR:ppla02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BBI15_12930
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_5 HTH_24 HTH_23 Rv2175c_wHTH HTH_IclR CT_C_D Sigma70_ECF HTH_28
Other DBs
NCBI-ProteinID: ANU21022
UniProt: A0A1C7EC96
LinkDB
Position
236430..237188
AA seq 252 aa
MVNQKLSNAELAQWGNWQQNRDQDAGDYLVAKYLPLVDYVIQRFLISLPKTVDKDEVRSY
AYEGLLDALDKFKPEKDWKFETYAGWRIKGAIIDGLRKSDWLPRSLRDKVKKIEKAYAEL
EQQKGESASDQEVSEYLGMTPAELNRAVSEAALSAMLSMDDDQANLEERMPRATIGSPER
ELSGQMTKEALAKAIATLPEKEKLTVSLCYFEEMKLTEIAEILGLSVSRVSQLHSKAMLR
LHAAMLSVHEHY
NT seq 759 nt   +upstreamnt  +downstreamnt
ttggtaaatcagaaattgtcgaatgcagaactggcgcaatggggcaactggcagcagaac
agggaccaggatgccggcgattatttagtcgcgaagtatttgcccctggtggattatgtg
attcaacgctttcttatcagcctgccgaaaactgtcgacaaagacgaagtccgaagctac
gcctatgaaggcttgctggacgcactcgataaattcaagccggaaaaagactggaaattc
gaaacttatgccgggtggcggatcaaaggggcaatcatcgacggcctccggaaaagcgat
tggctgccccgttcattgcgggacaaagtgaagaaaatcgaaaaagcgtacgccgaattg
gagcagcagaaaggcgaaagtgccagtgaccaggaagtgagcgaatacttggggatgacc
ccggcagaattgaaccgcgccgtctcggaagcggccctatcggcaatgctgtcgatggat
gacgaccaggcgaacctggaagaacgcatgccacgcgccactattggttcgccggaacgc
gagctgtccgggcagatgaccaaagaggcgttagcgaaagccattgccacattgccggaa
aaagagaaattgacggtttcgttatgttattttgaagagatgaagctgaccgaaatcgcg
gagattctcggtctcagcgtgtcgagggtgtcgcagctgcattcgaaagcgatgctgcgg
ctgcacgcagcgatgctatcggtccatgaacattattaa

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