Planococcus plakortidis: BBI15_14495
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Entry
BBI15_14495 CDS
T04812
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppla
Planococcus plakortidis
Pathway
ppla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBI15_14495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppla03019
]
BBI15_14495
03009 Ribosome biogenesis [BR:
ppla03009
]
BBI15_14495
Enzymes [BR:
ppla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBI15_14495
Messenger RNA biogenesis [BR:
ppla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBI15_14495
Ribosome biogenesis [BR:
ppla03009
]
Prokaryotic type
rRNA helicases
BBI15_14495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
CMS1
ERCC3_RAD25_C
Helicase_RecD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANU21793
UniProt:
A0A1C7ECP3
LinkDB
All DBs
Position
542031..543461
Genome browser
AA seq
476 aa
AA seq
DB search
MGFEEATPIQEGTIRLGMEGKDIIGQAQTGTGKTTAFGIPLIEKIDTRDGNVQGLVIAPT
RELAIQVSEELYRLGKDKNVRILSVFGGQEIGRQIRALKNRPQIIVGTPGRLLDHINRRT
LKLENVNTLVLDEADEMLNMGFIEDIQSIMSNVPEARQTLLFSATMPDPIRRIAEKFMKS
PEIVKIKSKEMTVENIEQFFVKSVEREKFDILSRLLNVHQPELAIVFGRTKRRVDELAHA
LNIRGYLAEGIHGDLSQAKRMSVLKQFKANKIDILVATDVAARGLDISGVSHVYNFDIPQ
DPESYVHRIGRTGRAGKKGVAVTFVTPREMGYLSIVERTTKKKMQALVPPTADEAVLGLQ
RVAMEQLETMTEKNNLGSYRELATEMLEKHDAVDLIAAALKTLTKDPEDAPVQITEERPL
PSRGGGGYKGKGGGRSGGGYKGKGGGRSSGGGYKGRRDSGRASGGGRPGRTRRHES
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgaggaagcgacacctatccaggaaggcacaatccgcctgggcatggaaggc
aaagacattatcgggcaagcacaaacaggtactggtaaaacaaccgctttcggtattccg
ttgatcgagaaaatcgacacacgtgacggaaatgtgcaaggcttggtcattgcaccgaca
cgcgaattggcaatccaggtttctgaagagctttacagactaggtaaagataaaaacgtg
cgcattttgtccgtattcggcgggcaggaaatcggccgccagatccgcgctttgaaaaac
cgccctcaaatcatcgtcggcacacctggtcgtttgcttgaccatattaaccgccgcacg
ttgaagcttgaaaacgtcaatacactcgtgttggatgaagctgatgaaatgctgaacatg
ggattcatcgaagacatccagtcgatcatgtcgaatgtccctgaagcccgccaaacgctt
ctgttctctgcaaccatgccggatccgatccgccgcatcgcagaaaaattcatgaagtcg
cctgaaatcgtcaaaatcaagtcgaaagaaatgactgtcgaaaacatcgagcagttcttc
gtgaaatccgtagaacgcgagaagttcgatattctttcccgcctgttgaacgttcatcag
ccggaactcgccatcgtcttcgggcgtacgaagcgccgcgttgatgagttggcacacgca
ttgaacatccgtggctatttggccgaaggaattcacggcgaccttagccaagcgaagcgc
atgtctgtcttgaagcagttcaaggcaaacaaaatcgatatccttgttgcgactgatgta
gcggcacgcggacttgatatctcaggcgtatctcatgtatacaactttgatatcccgcaa
gaccctgaaagctatgttcaccgtatcggccgtactggccgtgcaggcaagaaaggcgta
gccgtaactttcgttacgccacgcgaaatgggctacttgtcaatcgttgaaagaacgacg
aagaaaaaaatgcaggcgctagtgcctccgactgctgacgaagcagttctagggctacag
cgtgttgccatggaacaattggaaacgatgaccgagaaaaacaatctcggcagctatcgt
gagcttgcgacagaaatgttggagaagcacgacgcagtcgatttgatcgcggcagccctt
aaaacgctgacgaaagatccggaagatgcgccagtccaaattaccgaagaacgcccattg
ccatcacgtggcggtggcggctacaaaggtaaaggcggcggacgttccggcggcggatac
aaaggcaaaggcggcggacgctcgtctggtggcggctataaaggccgccgtgactcagga
cgcgcttcaggcggaggacgccctggacgcactcgccgtcacgaatcctaa
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