Planococcus plakortidis: BBI15_14565
Help
Entry
BBI15_14565 CDS
T04812
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
ppla
Planococcus plakortidis
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppla03021
]
BBI15_14565
Transcription machinery [BR:
ppla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI15_14565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_37
GerE
HNF-1_N
HTH_3
Packaging_FI
DUF1492
DUF134
KORA
Sigma70_ECF
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU21322
UniProt:
A0A1C7ED60
LinkDB
All DBs
Position
552227..553009
Genome browser
AA seq
260 aa
AA seq
DB search
MSKQSHPNQPTKEQVLEWIEAYQKTEDEEAQTNLVLNYRRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIRRYDPSYGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKA
TVEVLTTELQRSPQVWEIAEYLDVDEDDVLEAMEMGKSYQALSMDHSLEADSDGSTVTLF
DVVGQEDDGYEKADQRMLVAEAMNVLSDREKQIIQYTYIEQLSQKEAGDRLGISQMHVSR
LQRKAIKKLQEAILAAGGVS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaatctcatcctaatcagccaacgaaagaacaggtactggaatggattgaa
gcttatcaaaaaaccgaggacgaggaagcccagactaaccttgtcctcaattatcgccgt
ttagtggaatcgattgcccgcaagtattcaaatgggaaatcctaccacgaagacattgca
caagtgggcatgcttggcttgctcggtgcaatccggcgttatgatccgtcttatggccgc
agtttcgaagctttcgcggtgccgactatcatcggtgaaatcaagcgctttttgcgcgac
aaaacatgggcaatccatgtgccgcgccgcataaaggaactggggccgcgcatcaaagcg
acggttgaagtgttgacgacagagcttcagcgttctccacaagtttgggaaatcgctgaa
tatctggatgttgatgaagacgacgttttggaagcgatggagatgggcaaaagctatcaa
gcactttccatggaccattcactcgaggcggattcggacggcagtacggttacattgttt
gatgtagtcggccaggaagacgacggatatgaaaaagcggatcagcgcatgctcgtggcg
gaagcgatgaatgtcctttccgatcgggaaaagcagatcatccaatacacctacatagag
cagctgagccagaaggaagcgggcgaccgcctggggatttcccagatgcacgtttcacgc
cttcaacgaaaagccatcaaaaagcttcaggaagcgattttggctgctggcggggtttcc
tag
DBGET
integrated database retrieval system
