Planococcus plakortidis: BBI15_15130
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Entry
BBI15_15130 CDS
T04812
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppla
Planococcus plakortidis
Pathway
ppla03420
Nucleotide excision repair
ppla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBI15_15130
03430 Mismatch repair
BBI15_15130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppla03400
]
BBI15_15130
Enzymes [BR:
ppla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBI15_15130
DNA repair and recombination proteins [BR:
ppla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBI15_15130
MMR (mismatch excision repair)
Other MMR factors
BBI15_15130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ANU21416
UniProt:
A0A1C7ECK9
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All DBs
Position
661822..663714
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AA seq
630 aa
AA seq
DB search
MQYTLTRNQKEIVEFNEGSLLVIAGAGSGKTHILTERVRKLIYDKRGHYRVLALTFTNKA
AQEMKERLNDVEELENKAFIGTIHNFCLDVLSAKGDVIGIKNDFHIFGSDSDKIEVLRQI
VESTPQLQKYVRQHPNYNNFLRLTIDYITRQKRSLKSSYLAEVSSAIFESDEKAFSYLYR
EYDDLLRSQNALDYDDLIFLTYRIFTERPAIAKLYKKLYKYLCIDEAQDLNFSQYQLIKS
FCGKDYNNTMLVGDPNQAIFGFIGSSSKFMCEQYIEDFRPEVFYLKENFRSAENIVKVAK
RLEPAMEIEAVLPIQGEVSLQTFTTELEEAKWVYDNIKNVYKNGHPEIDGVIPYENIAVL
GRNRYVLSDLEEILEKDGIPYYTKLSDTFESESEFAKAFELGVRLIINPVDMLHLQQLLN
LLNISHLNEKINGSNNTNGIELLNEISKEITGEWKSHIDIINHVLKDLSIKNPKFNVCID
KLTEYANKTWNESDENFSLVINDLNMWKEKWRYYVKQTNLDSRNLIQFRNQISMGITQKP
REGVALLTVHTAKGLEFDVVYIMGMCDGTFPDYRAIKKGEESLLEEKHNAFVAITRAKRV
AYLTYPLEKQFKWGTKKQIPSRFLKTMGFI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacactctgacacgcaaccaaaaagaaattgtagaatttaatgaaggaagttta
ttagtaatagcaggtgcaggaagtggcaaaactcatattttgactgaaagagtacgtaaa
ttaatctatgacaaaagaggtcattatagagtcctagccctcacatttacaaataaagcg
gctcaagaaatgaaagagcgcttaaatgacgttgaagaactcgagaataaagcatttata
ggtacgattcacaacttttgtttagatgtattgagtgcaaagggtgatgtaattggaatt
aaaaatgattttcatatttttgggagtgattcagataaaattgaagtattaagacaaatt
gttgaatctactcctcaattacaaaagtatgttcgacaacatccgaattataataatttt
cttaggcttactatagattatattactagacaaaagaggtctttaaaatcgtcatatttg
gctgaagttagtagtgcgatttttgaaagcgatgaaaaagctttttcatatttatataga
gaatatgatgacttattaaggagtcaaaatgctttggattatgatgacttaatttttcta
acttatcgaatttttacagaaagaccagctatagcaaagctatataagaaactctataaa
tatctgtgtattgatgaagctcaagacttaaatttctcccaataccaattaataaagtcg
ttctgcgggaaagattataataatacaatgctagttggtgacccgaatcaagcgatcttt
ggattcattggttcgagtagtaaatttatgtgtgaacaatatatagaagactttaggccc
gaagtattttatcttaaggaaaattttagatctgcagaaaatatagttaaggttgccaaa
agattagagcccgcaatggaaattgaggcagttttaccaatccaaggagaagttagttta
caaacttttactactgaactggaagaagcaaaatgggtttatgataatataaaaaatgtt
tataaaaatggccatcctgaaatagatggtgtaataccatatgaaaatatagcagttttg
ggtagaaacagatatgtcttatcagatttggaagaaatacttgaaaaagatggaatacca
tattacacaaaattaagcgatacttttgaaagtgagtctgaatttgcaaaggcattcgaa
ttgggggttcgattaattattaatccagttgatatgctgcatttacagcaattattaaat
ttattaaatattagtcatttaaatgaaaaaattaatggctctaataatactaatggtata
gagttgcttaacgaaatatctaaagaaattactggagaatggaaatcccatatagatatt
attaatcacgtacttaaagacttatcaattaaaaatcctaaattcaatgtttgtattgat
aaactaactgagtatgcaaataaaacatggaatgaaagcgatgagaatttttcgttagtt
attaatgatttaaatatgtggaaggaaaagtggaggtattacgttaaacagactaattta
gattcaagaaatttaattcaatttagaaatcaaatatctatgggtataactcaaaagcca
agagaaggcgtggcattattaacagtgcatacagctaaaggtttggagttcgatgtagta
tatattatggggatgtgcgatggaacattcccggattatcgtgcaatcaaaaagggagaa
gaaagtttacttgaagaaaaacacaatgcctttgtagctattacaagagctaaaagggtt
gcttatttgacatatccgttagaaaagcagtttaagtggggtacaaaaaaacaaatacct
tctagatttttaaaaactatgggttttatttaa
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