Pleuronectes platessa (European plaice): 128424541
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Entry
128424541 CDS
T09923
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128424541
03041 Spliceosome [BR:
pplt03041
]
128424541
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128424541
Spliceosome [BR:
pplt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128424541
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
128424541
NCBI-ProteinID:
XP_053266734
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Position
19:complement(6600418..6609382)
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AA seq
385 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTP
NETTSTKQLSFDEVVSQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVHMPQQNTVSFAAQP
YSQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGSMV
EPGQGVNGTMLTNQAGMSAAGYHTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gccctcatcttggagttgtttggccaaattggaccctgcaagagctgtaaaatgatagta
gatacggcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacaacgccaaccagtcaaaagaaagacacaagcagtcacttccatgtctttgttggg
gatcttagtcctgaaattaccacagatgacataaaagcagcttttgctccttttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtgtccttcttcaacaaatgggatgcagagaatgcaatacagcagatgggagggcagtgg
ttgggaggccggcagatcaggaccaactgggccacaaggaagcctgctcctaaaactcca
aatgaaacaaccagtaccaagcagctgtcctttgatgaggtggtgagccagtccagtccc
agcaactgcaccgtctactgtggaggagtcaccacaggcctcacagagcaaattatgaga
cagaccttctcacccttcggccaaataatggaaatccgtgttttcccagacaaaggctac
tcatttgttaggttcaactcccatgaagcagcagctcatgccattgtctcggtcaatggc
acgtccatagagggctatgttgttaagtgttactggggcaaagaaacaacagacatggtt
agccccattcagcaggttcatatgccacagcagaacacggtgagcttcgcggcgcagccc
tacagccagtggggtcagtggtacagtaacacgcagcagattggtcaatatgtgcccaat
ggatggcaggtgccgagctacggagtttatggacagacctgggatcagcagggctacaat
catttacatgctggtgccggatggacaggagtgggcgccgtgagcaacggcagcatggta
gagccgggacagggagtcaacggaacgatgctaaccaaccaggctggcatgagcgctgct
ggctaccacacccactga
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