Pleuronectes platessa (European plaice): 128424573
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Entry
128424573 CDS
T09923
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128424573 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pplt04990
]
128424573 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
pplt04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128424573 (pdlim5b)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
128424573
NCBI-ProteinID:
XP_053266791
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Position
19:complement(13257581..13293435)
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AA seq
604 aa
AA seq
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MSSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAIRAKMSIGDIILSINGIATD
RMNHLEAQNKIKACTGNLDLSLQRASSVPKNGTPKDEPQEIIKPVPITHPAPSSTYTKPS
FQPSPAYNKTARPFGGGTSSPVAPKVASIPSESSAFTPAAPSQPPQPPQPPFPLRSSHPA
PNSAPGVRSTLTSPSASSSSSSNSSSPARVTAPSSNPTVPQPSVYNTPISLYSNANACEV
AMGQRRGLLESQGLSEHFNGKPVVVADVPVSPPSDSSKKRLIEDTEDWHPRSGTSQSRSF
RMLAQLTGTENEVVPENNGKNEAFDQSSPAVHTSPATKTFSKSAAAPRNGNVGPASTFKS
PPAMNKPLHQSGAPPGFPKGGAAPSFGKVTVQAPKGPERPTPQPHPEDLNPLVQRAEHIP
AGTRTPMCNKCNKVIRGPFLVAMGMSWHPEEFNCAHCHSSLVDRGFVEEKDHVYCEHCYE
QFFAPTCSHCSQKILGEVMNALKQTWHVSCFVCTACQQPIRGNTFHMEDGHPYCERDFYN
LFGTNCHGCDFPIEAGDKFLEAVGFTWHDTCFVCTVCSANLEGQAFFSKKDKPLCKKHAH
TVNL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagcgtctccctggctggccccgccccctggggcttcagactgcaa
ggggggaaggacttctgtctgcccctcaccatctcacggctgaccgatggcggcaaggcg
atccgagccaagatgagcatcggagacatcattctctccatcaacggcatcgccacggac
cgcatgaatcacctcgaggcccagaacaagatcaaggcctgcacaggcaatctcgacctc
tctctacagagagcctccagtgtccctaaaaatggaacgcctaaggatgaacctcaggaa
atcattaagcctgtcccgatcactcaccccgccccgagctccacgtacaccaagccatcg
tttcagcccagccccgcctacaacaagacggctcggcccttcggggggggcacctcttcc
ccggtcgcccccaaagtagcctccattccatccgagtcgtccgctttcacgcctgccgcc
ccttcccagccaccgcagccaccgcagcctccgtttccactcaggtccagccaccctgct
cccaactcagctccaggggttcgctccaccctcacctccccgagcgcctcctcctcctcc
tcgtctaactcctcatcccctgccagagtgacagccccctcctccaatcccactgtcccg
cagccctccgtctataacacgccgatcagcctctactctaacgccaatgcctgtgaggtg
gctatgggccagagacgaggtcttttggagagccagggtctgtcagagcacttcaacggg
aaacctgttgtagtggccgatgttcccgtgtccccgccgagcgattccagcaagaagcgt
ctgattgaggacacggaggactggcacccccgatcgggcacctcccagtcccgctccttc
cgtatgctggcccagctcaccggcacggaaaacgaggtagttccggagaacaatggaaag
aacgaggccttcgaccaatcctctcccgctgtgcacacgtcgccggcaacaaaaacattt
tccaaatctgcggcagctcccaggaacggcaacgttggccccgcgtccacattcaagagc
ccccccgccatgaacaagcccctgcaccagtctggagctccaccaggtttcccaaagggt
ggagccgctccttcgtttggcaaagtgaccgttcaggctcccaagggtcccgagcgcccc
accccccagccacatccggaggacctcaaccctctggtgcagcgggccgagcacatcccg
gccggtacacgcacccccatgtgcaacaagtgcaacaaagtcatcaggggcccgttcctc
gtggccatgggcatgtcgtggcaccccgaggaattcaactgcgctcactgccactcctcc
ctggtagaccgaggcttcgtggaggagaaggaccatgtgtactgcgaacactgctatgag
caattcttcgcccccacctgctcccactgcagccagaagattttgggggaggtcatgaat
gccctgaaacagacctggcatgtgtcctgtttcgtctgcactgcctgccagcagccgatc
aggggcaacacgttccacatggaggacggacacccgtactgcgaaagagacttctataac
ctgtttgggaccaactgccatggctgcgattttcccatcgaggcaggcgacaagttcctg
gaggctgtgggattcacctggcacgacacctgctttgtgtgcacggtgtgctctgctaat
ctggaaggtcaggcgttcttctccaaaaaggacaagcccctgtgcaagaagcacgcccac
actgtcaacctctga
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