Pleuronectes platessa (European plaice): 128424707
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Entry
128424707 CDS
T09923
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128424707 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128424707 (exosc2)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128424707 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128424707 (exosc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
128424707
NCBI-ProteinID:
XP_053267027
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All DBs
Position
19:complement(12801816..12804783)
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AA seq
291 aa
AA seq
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MAADMRLPDIRKPVSLSTFDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEVQR
VDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGELRR
RSAEDELTMREYLQEGDLISAEVQSVFADGALSLHTRSLKYGKLGQGVVVQLSPSLIKRQ
KSHFHNLPCGASIILGNNGYVWLYPTPENQEEEAGGFYTSLEPVSLSDREVISRLRNCLL
ALAAHKVLLFDTSVLYCYESSLQHQVKDILKPEVMEEIVMLTQQKLLEHEA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacatgagattaccagatattcgaaaaccagtgtcactttccactttcgac
cgaaaggatctggtggttcccggcgatgtgatcacgtcagacactggtttcatgaggggt
catggtacctatgttgatgaagacaagctgacagcttcagtcgctggagaggtgcagaga
gttgacaagctgatctgcgtcagacctctcaagaccaggttcaacggtgaggttggagat
gtggtggttgggagaattacagaggtacaacagaaacgctggaaggtggagaccaactct
cggctggactctgtcctcttgttgtcctctgtcaatctgcctgggggagagctgaggaga
agatcagcagaagatgagctcaccatgagagaataccttcaggagggcgatctcatcagt
gcggaggtgcagtctgtcttcgcagacggagctttatcacttcacacccgtagtttaaag
tacggaaaattgggtcaaggggtggtggtacagctttctccttctctgatcaagaggcag
aagtcacatttccacaacctgccgtgtggcgcatccattattctcgggaataacggttat
gtgtggttgtatccaacaccagaaaaccaggaggaggaggctgggggcttctacaccagt
ttggagcccgtgagcctgtcggatcgagaagtgatttcacggttgaggaactgcctgtta
gcgttggctgcacacaaggtccttttgtttgacaccagtgttctctactgctatgaatct
tcacttcaacaccaggtcaaggacatcttgaaaccagaagtgatggaggagattgtaatg
ttgacacaacagaagctgttggaacacgaagcttag
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