Pleuronectes platessa (European plaice): 128424927 Help Entry 128424927         CDS       T09923                                  Symbol col2a1b Name (RefSeq) collagen, type II, alpha 1b   KO K19719   collagen type II alpha Organism pplt  Pleuronectes platessa (European plaice) Pathway pplt04510   Focal adhesion pplt04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:pplt00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128424927 (col2a1b)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128424927 (col2a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pplt00536]     128424927 (col2a1b) Glycosaminoglycan binding proteins [BR:pplt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128424927 (col2a1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  128424927 NCBI-ProteinID:  XP_053267353 LinkDB All DBs Position 2:complement(10052061..10090956) Genome browser AA seq 1490 aa AA seqDB search MFSFMDSRTVLLLVATQVCLLAVVRCQEDDQEDPISCLQDGQSYNDKDVWKPEPCRICVC DTGTVLCDEIVCEDLKDCPKPEIPFGECCPICAAEPSTPIGTPGARGQKGEPGDITDVVG PRGPSGPMGPPGEQGARGSRGDKGDKGQHGPRGRDGEPGTPGNPGPPGPAGPNGPPGLGG NFAAQMAGGFDEKSGGAQMGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGEAGEPGQSG PMGPRGPTGPSGKPGDDGEAGKPGKSGERGPSGPQGTRGFPGTPGLPGIKGHRGYSGLDG AKGETGSVGSKGESGAPGENGAPGPMGPRGLPGERGRPGSSGVAGARGNDGLAGPAGPPG PVGPSGAPGFPGSPGTKGEAGPTGARGPEGAQGPRGESGTPGSSGPSGASGNPGTDGIGG SKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEAGPKGELGPSG PQGAHGPLGEEGKRGPRGEPGAAGPLGPPGERGSPGNRGFPGQDGLAGPKGAPGERGPAG ASGPKGANGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGGSGEDGRPGPPGPQGARG QPGVMGFPGPKGASGEAGKSGEKGLAGAGGLRGLPGKDGETGAAGPPGPAGIAGERGEQG QPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGGAGATGPRGERGFPGERGAAGPQGLQG PRGLPGTPGTDGPKGAIGPAGGAGAQGPPGLQGMPGERGGAGIPGPKGDRGDIGEKGPEG ASGKDGGRGLTGPIGPPGPGGPNGEKGESGPAGPSGAPGTRGAPGDRGETGPNGPAGFAG PPGSDGQPGTKGEQGESGQKGDAGAPGPQGPSGAPGPAGPTGVFGPKGARGAQGPSGATG FPGAAGRVGPPGPNGNPGPAGPAGPSGKDGPKGVRGDGGPPGRQGDAGLRGPAGTPGEKG DAGEDGPPGPLGPSGPQGLGGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGSAGGAGDRG PPGPVGPPGLTGPSGEPGREGNAGSDGPPGRDGSPGTKGERGTTGPAGAPGAPGAPGASG PVGPTGKQGDRGEAGAQGPAGPSGPAGARGMPGPQGPRGDKGEAGETGERGQKGHRGFTG LQGLPGPPGQSGDQGATGPSGPSGQRGPPGPSGPGGKDGSNGMPGPIGPPGPRGRSGENG PSGPPGNSGPPGPPGPPGPGIDMSAFAGLGQTEKSTDPLRYMRADQASGNLRQHDAEVDA TLKSLNNQIENIRSPEGSRKNPARTCRDLKLCHPDWKSGEYWIDPNQGCTIDAIKVFCNM ETGESCVQPKPSGIPRKNWWSSKSKDRKHVWFGETMNGGFHFSYGDDSLAANTAAIQMTF LRLLSTEAAQNITYHCKNSVAYLDASTGNLKKAVLLQGSNDVEIRAEGNSRFTYSVMEDG CTKHTGQWGKTVIEYRSQKTSRLPIVDIAPMDIGGSDQEFGVDVGAVCFL NT seq 4473 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttatggattccaggactgtactgctgcttgtagcaacccaagtctgtcta ttagccgttgtgagatgtcaggaggacgaccaggaggaccctattagctgtctacaagac ggacagagctataatgacaaggacgtatggaaaccagagccgtgtcgcatctgtgtgtgc gacaccggaaccgtcctgtgcgacgaaattgtctgcgaggacctaaaagactgccccaaa cccgagatcccattcggagagtgttgccccatctgcgcagccgaaccgtccacgcccatc ggaacacctggagctagggggcagaaaggcgagcccggagacattaccgatgttgtagga ccgagaggaccatctggccctatgggcccaccaggagaacaaggagcccgcggatcaaga ggagacaagggagataagggacagcatggtccccgtggcagagatggtgagcctggcacc cccggaaaccccggcccccctggacctgcaggaccgaacggaccccctggccttggagga aactttgcagctcagatggccggtggcttcgacgagaagtccggcggcgcacagatgggc gtgatgcagggaccgatgggccccatgggacccagaggaccacctggccccagtggatca cctggcccacaaggtttccagggtaacccaggagaggctggagagcccggtcaatctggc cccatgggcccccgtggccccactggaccttctggaaaacccggagatgatggtgaagct ggaaaacctggcaaatcaggcgagcgtggaccttctggacctcagggaactcgtggattc ccaggaactcccggcctgcccggcatcaagggccacaggggttattcaggtcttgatggt gcaaagggagagaccggatctgtcggttctaagggtgagtctggagctcccggagagaat ggcgcccctggacctatgggacctcgtggcctgcccggcgagagaggtcgtcctggatcc agtggagtcgccggagctcgtggaaatgatggcttggccggccctgctggtcctccaggc ccagtcggtccttctggagctcctggcttccctggctctcctggtacaaagggagaagct ggtcccactggtgctcgtggacctgagggtgctcaaggacctcgtggagagtcaggtaca cctggatcttctggaccttctggtgcttctggaaaccctggtactgatggtatcggtgga tctaaaggatcagctggagctcctggtattgctggtgctcctggtttcccaggacctcgt ggacctcccgggcctcagggagcaactggaccactcgggcccaaaggaacatctggggac ccaggtattccaggtttcaagggagaggctggacccaaaggagaactcggaccctcaggt cctcagggagcacatggcccactgggagaagagggtaagcggggacccagaggagagccc ggtgctgctggtccacttggacctcctggagagagaggatcccctggtaaccgtggtttc cccggtcaagatggtctggctggtcccaagggagcccctggtgagcgcggacctgctggt gccagtggtcccaagggagccaatggtgaccccggccgtcctggagagtctggtctgccc ggtgccagaggcctgactgggcgacctggtgacgctggtcctcaaggcaaagtcggacct tccggaggttctggtgaggatggacgtcctggaccccctggcccacagggagcccgcgga cagcctggtgtcatgggattccccggacccaagggagcgtctggtgaggctggcaagtct ggagagaagggactggctggagctggaggtctgagaggtctgcccggcaaagatggagaa accggcgctgctggaccccccggccccgctggcatcgctggagagagaggagagcaagga cagcccggaccctccggcttccagggtctgcctggacctccaggcccccctggagaggga ggcaagcccggagaccagggagttcctggagaggctggaggtgccggtgcaactggaccc agaggtgagcgtggtttccccggagagagaggagctgctggtcctcagggtcttcaggga cccagaggtctgcctggaacccccggaactgacggacccaagggagccatcggtcctgct ggtggtgctggagctcagggaccccccggcctgcagggtatgcctggagagagaggtggt gccggcattcccggacccaaaggagacagaggtgacattggagagaaaggacctgaaggt gcttccggcaaagacggtggaagaggtctcactggtcccatcggcccccctggtcctggt ggtcccaacggagagaagggtgaatcaggtcctgctggtccctctggagctcctggtacc cgtggtgctcctggtgacaggggtgagactggacctaatggacctgctggattcgctgga cccccgggctctgatggtcaacctggaaccaagggagagcagggagagtccggacagaag ggagacgctggtgcccccggaccccaaggaccctctggtgcccccggacctgctggtccc acgggtgtgtttggacctaaaggtgctcgtggtgctcagggaccttctggtgccactggc ttccctggagctgctggccgtgttggtcctcctggtcccaacggtaaccctggacctgct gggcctgctggtccttctggcaaagacggacccaagggtgtgaggggagacggtggacct ccaggccgacagggtgacgctgggctccgcggccccgccggaactcccggagagaaggga gatgctggagaggacggtcctcctggtcccctgggtccctcaggtcctcagggtctgggt ggtcagcgcggtattgtcggtctgccaggacagcgtggagagagaggcttccccggtctg cccggaccctcaggtgagcccggaaagcagggaagtgctggtggcgccggagaccgtgga ccccccggacctgtcggaccacctggactcaccggaccttcaggagagcccggcagagag ggcaacgctggatctgatggacctcctggtagagatggttctcctggaaccaagggtgaa cgtggtaccaccggccctgctggcgctcctggtgctccaggcgctcccggtgcctccggc ccagttggtcccaccggcaaacagggagacagaggagaggctggtgcccaaggacctgct ggaccttcaggacccgctggagcccgaggaatgcccggaccccaaggaccccgtggtgac aagggtgaggctggggagactggtgagagaggacagaagggacacagaggcttcactggt ctgcagggtctgcccggacctccgggtcaatctggagatcagggagctactggacctagt ggaccttctggacagagaggaccacctggtccttctggtcctggtggaaaggacggttca aacggcatgccaggacccatcgggccccccggaccccgtggtcgctctggagagaatggt ccctctggtcctcccggtaactctggaccccccggtcctcctggtccccccggccccggt atcgacatgtctgccttcgctggcctgggccaaaccgagaagtccaccgatcccctcagg tacatgagggccgaccaggcctctggaaacctccgtcagcacgatgccgaggtcgacgcc accctcaagtctctcaacaaccagattgagaacatccgcagccccgagggatccaggaag aaccctgcccgcacctgcagagacctgaagctgtgccaccctgactggaagagcggagag tactggattgatcccaaccagggctgcactatcgatgcaatcaaggtgttctgcaacatg gagacaggagagtcctgcgtccaacccaaaccttccggcatccctcgtaagaactggtgg tccagcaagagcaaggaccgcaaacacgtctggttcggagaaacaatgaatggaggattc cacttcagctatggtgacgacagcctggcggccaacacagctgccattcagatgaccttc ctgagactgctctccaccgaggctgctcagaacatcacctaccactgcaagaacagcgtg gcctacttggacgcctcgacagggaacctgaagaaggccgtgctgctgcagggctccaac gacgtggagatcagagctgagggcaacagccgcttcacctacagcgtgatggaggacggt tgcacgaaacacacgggccagtggggcaagacggtgatcgagtacagatcgcagaagacc tctcgtctccccatcgtggacattgctcccatggatattggtggatcagaccaggagttt ggagtcgacgtcggggcggtctgcttcttgtaa

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