Pleuronectes platessa (European plaice): 128425092
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Entry
128425092 CDS
T09923
Symbol
tnca
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
pplt04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128425092 (tnca)
04518 Integrin signaling
128425092 (tnca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128425092 (tnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pplt00536
]
128425092 (tnca)
Glycosaminoglycan binding proteins [BR:
pplt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128425092 (tnca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_VIN3
Fn3_Dep-1_2nd
DUF7949
EGF
hEGF
NDNF_C
Motif
Other DBs
NCBI-GeneID:
128425092
NCBI-ProteinID:
XP_053267563
LinkDB
All DBs
Position
19:complement(6396464..6445922)
Genome browser
AA seq
2378 aa
AA seq
DB search
MGRRSILGCFLLTLLLSLSTAGLVKKIIRHRRQTLIAPKEHNVTLPSADHPVVFNHVYNI
NVPASSLCSVDLDAPESTQLLPKDLPASSGDHITEHTVDGENQIVFTHRINIPRKACGCA
DDLPGLKELMSRLEMLEGEVSILRDQCNSDRPCCSAQVAGELGTKPYCNGHGNYSTDTCG
CVCEHGWKGPNCTEAECPGNCQDRGRCVDGKCECFKGFSGEDCTLQPCPVDCGAYGLCVE
GICVCSDGFFGDDCSQTKCLNNCRGQGRCDKGDCMCDEPWTGLDCSELMCPKDCYDHGRC
VNGTCYCDEGYAGEDCGERSCPNNCQGNGFCVDGRCVCTAGYSGVDCSKLTCLNDCNDRG
TCFNGMCICDVGYQGEDCSQLACLNNCNVRGQCINGRCACDVGFQGDDCSELSCPRDCLQ
RGRCVNGQCVCDEGFAGEDCSIMTCISNCYGRGECIDGRCACHAGFTGDDCGALSCPSNC
QNRGRCIDGQCVCDEGFTGEDCSQKACPNDCLARGYCVDGKCMCQEGYSGNDCSVLACPD
NCNDRGRCIDGKCTCEGGYEGESCTEISCLNNCQDKGRCVNGQCVCDEGFIGEDCFEVSP
PKDLIVGEVTANTVDLTWTNDMLVTEYLVTYVPTSPGGLLQENKVSGDKTSATVKELEPG
IEYLISVYAVLSNKRSVPVSARVATALPQPEGLKFKSVRETSVEVMWDQLDIPFDGWEIY
FRNTKEENGKVVSNLPSSQNQFLQSGLGPGQEYEVSITIIKNNTRGPQASKTVTTKIDGP
RQVEVKDVTDSSALVSWSQPVVPMDRVTMFYRPTSDPSDESSAEIFRPDKQYSIDGLRPD
TEYTVMLSSRSGNISSDPVATNFTTALDAPRHLRAISQTDSSITLEWTNSRADVSSYRVK
YTPISGATHGEDVFLRGPGDTTKATITGLNPGAEYGIGVTAMKTERESLPATTNAETDID
PPRDFEEDQSTETSLTLRWEKPRAKFGGYRLVYVSRDGQVEEVEIPATATSYVVPSLTPG
MGYTLTLTAERGHKRSTPVILSTSTASFTFYLADSDDAELTPTGSEDNVISFVNLEPSES
QFSGMEPEDELGTLTISGITSDGFDLSWRLKAHSLYDSFAVEYKDPQRLWDVKEVPLPGN
ATGSRLEGLAASTEYQIKLYGITSSQRSALLEAVAVTAPEPTSPDVLALSIKEATTTSQS
ALDNDTIQTTDPLQAVNTEAPSTSDTVVMSSGAESSNLNVLGNLQITNVTSASVSLAWSA
PDEAFDSFMVELSSPSGVTQAHVTTLPGNVRKAEIKGLTPSTHYDVTLQGLLDGNRSLPL
KVLATTEDLKPMVVNLTISDITWDSFTASWSPTVGDFDSFVIEVTNLENFAESQNLSLSG
DAFSLDISGLNPNTSYLVGLYGMYQGSFLEPVYSEATTANQPVLGKLYISNLTSESFSIL
WNATEGEFDGFILEIIDSDWLMEPKEYNISHNDKSINVRGLRPSTDYIAYLYGTYKGSRT
SAVSIVASTAEEPDLSRLVVSNITSDRFFLSWRTREKPFDNFVVEVRESALPSQAMGRAL
PGDVRSTVMAGLKASTSYNIKLYASTGGQNTQPLFAVASTEDLPQLGPIAASSASPHNLS
LSWSTVSGHFDGFVIRVSDSEQQSDPLEIRLPGEIRNITVSNLMDATGYDIELYGISHGR
HTPSVLTHAVTASLPKVENLTISNITPYGFRVSWEVKQQLQQEDSPPSTGGFSHFHIVVT
DSGWLLEPQEFTVPGNQSHLDIWGLITGIGYELRLTGVSESGLLSRPLNTVAVTEAEPEV
EHLFVSDITADSFRLSWAADEDMFDRFVIKIRDSKRLSHPKEYSVIGEERTKVLNGLLSG
TEYEIELYGVTLDQRSQPIIGVAQTGLSTPMGLHFSEVTDSSAVVHWSMSPSPIDNYRIA
YVPFEGGSPMTVTVDGSVFEAVLPNMIPGKTYQVTVSAVKGLEESDPSTDTVTTALDRPQ
GLTAVNITDTTALLLWQPSVATVDGYVITYRADSVSPVVEHVSGNTVDFEMGSLVPGTQY
TVVVHAMKEAQKSGSAVTEFITDVDPPRDLTAINLQTDSATLTWKPPQAAVTGYTLSFSS
ADGVIREVVLSPTASSYSMAQLSGSTEYSVKLQAIAGPHRSRHVATVFTTIGQLFRRPRD
CAQIYLNGETTSGIYTIYVGGEDGQPIQVYCDMATDGGGWTVALRRQNGKLEFFRNWKNY
TAGFGNMNDEFWLGLSNLYKITSSGHYELRVDLRDKGESAYAQYDKFTLAEPRTRYKIYI
GAYSGTAGDSMTYHQGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSH
SKGINWFHWKGHEHSIEFAEMKIRPANFRNFESRKKRS
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaagaagcatcctgggctgcttcctcctgacccttctgctcagcttatcaacg
gctgggctggttaagaaaatcatacgtcatcgaagacagactttgatagctcctaaagaa
cataacgtcaccctccccagtgcagaccatcctgtggttttcaaccatgtctacaacatc
aatgttcctgccagttctctgtgctcagtggacctggacgcaccggagagcacacagctt
cttcccaaagatttgccagcttcgtcaggggatcacatcactgagcacactgtcgacggg
gagaaccagatcgtgttcacccaccgcatcaatataccacggaaggcgtgcggctgcgct
gacgacctgcccggcctgaaagagctcatgagccgcctggagatgcttgagggagaagtt
tccattttgagggatcagtgcaacagcgacaggccctgctgcagtgcacaggtcgcaggt
gaactaggaacaaaaccttactgcaacggccatggaaactacagcactgacacttgtggc
tgtgtatgtgagcatggctggaagggacccaattgcactgaggccgagtgtcccggtaac
tgccaggaccggggccgctgcgtggacggaaagtgtgagtgcttcaagggcttctctgga
gaggactgcacgctccaaccctgccctgtggactgtggagcttatggcctgtgtgtggaa
ggcatttgcgtttgctccgatggtttcttcggggacgactgctctcagaccaagtgcctc
aacaactgcagaggccaaggccgttgtgataagggagactgcatgtgtgacgaaccctgg
actggccttgactgctctgagctcatgtgtccaaaagactgctatgaccatgggcgctgt
gtgaacggtacctgctactgtgatgagggctacgccggggaggactgtggagaacgcagt
tgtcctaacaactgccaaggcaacggtttctgtgttgatggtcgatgtgtctgcactgcc
ggctacagcggagtggactgctctaaactcacctgcctcaacgactgtaacgacagaggg
acgtgcttcaacgggatgtgtatctgcgacgtaggctaccaaggagaagactgcagccag
ttagcatgtctgaacaactgcaacgtcagaggccagtgcataaatggacggtgtgcatgc
gatgttggtttccagggagatgattgctctgagctgtcctgtccccgcgactgcctgcag
agagggcgctgcgttaacggacagtgtgtgtgcgacgaaggcttcgccggcgaggactgc
agcatcatgacctgcatctcaaactgctacggccgcggcgagtgcatcgacggacgctgc
gcctgtcatgcaggcttcaccggcgatgactgcggtgcactgagctgccctagcaactgc
cagaaccgtggccgctgcatcgatggtcagtgcgtttgtgacgaaggcttcactggagaa
gactgcagtcagaaggcttgtcccaacgactgcctggccagaggatactgcgtcgacggc
aagtgcatgtgtcaggaggggtactctggaaatgactgctctgtgctcgcctgtccagat
aactgcaacgacagggggcgctgcatcgacgggaagtgcacatgtgagggtggatacgaa
ggagagagctgtacagagatcagctgcctcaacaactgccaggacaaaggccgctgtgtg
aacggtcagtgcgtctgtgatgagggattcatcggcgaggactgctttgaagtgtctcct
ccaaaggaccttattgtcggcgaggtcaccgctaacacagtagacctgacctggaccaat
gacatgttggtgacagaataccttgtgacgtatgtaccgaccagtcccgggggtcttctc
caggagaacaaagtgtctggggacaaaacttccgccactgtcaaagagcttgaacctggc
atcgagtatctgatcagtgtctatgctgtcctgagcaacaagaggagtgtccctgtcagc
gccagggtggctacagctctcccccagccagagggtttaaaattcaaatcagtgagagag
acgtcagtagaagtaatgtgggaccagctggacatcccctttgatggctgggagatctat
ttccgcaacacgaaagaagaaaatggaaaagtggtgagcaaccttccatcctctcaaaac
cagtttctccagtccggcttgggaccaggacaagagtatgaagtctccatcaccatcatc
aagaataacacgagaggaccccaagcatccaaaacagtcactaccaagattgacggccct
cggcaggtggaggtgaaggatgtcacggactcttcggcactggtgagctggtctcagcca
gttgttcctatggacagagtcaccatgttttacaggcccacctccgacccctcagacgaa
agcagtgcagagattttccgcccagacaagcaatacagcatcgatggtctgagaccagac
actgagtacacagtgatgctctcctccaggagtggaaacatcagcagtgaccctgtcgcc
accaatttcactacagccctggatgccccaaggcacctgcgggccatttctcagacagac
agcagcatcactctggagtggactaacagtcgggctgatgtcagcagctatcgggtgaag
tacaccccgatctctggagcaactcacggtgaggacgtgttcctgcgaggaccaggagac
accacaaaagctaccatcactgggctgaatccaggggcggagtatggaatcggtgttact
gccatgaagacagagagagagagcctcccagccactacaaatgcagaaactgacatcgat
cctcccagagattttgaagaagaccagtccacagagacctccctcactttgaggtgggag
aaacctagagcaaagtttggtggctacaggctggtatacgtctccagagatggccaggtc
gaggaggtggagatcccggccactgcaacaagctatgtcgtgcccagcctgactcctgga
atgggctacactctcacattgactgcagagaggggacacaagaggagcacgcctgtcatc
ctgtctacatccacagcctctttcacattttatttagccgactcagacgacgctgagcta
actcctacaggctcggaggacaatgtgattagctttgtgaatttagagccctctgagtcc
cagttctctgggatggagcctgaggatgagctcggaacgctgactatttcaggcatcacg
tctgatggatttgacctctcatggagacttaaggctcacagcctttatgatagctttgca
gtagaatataaagaccctcagcgattatgggatgtgaaagaggtccctcttcctggaaat
gccactggctctagacttgaaggcctggcggcatcgacagagtatcagataaaactttat
ggaataaccagtagccagagatctgcgctacttgaagctgttgcagtcacagcacccgag
cctacctccccagatgtacttgcgctgagtattaaagaagccacaacaacctcacagtct
gctctggataatgacacaattcaaaccacagatcccctccaagccgtaaacactgaggcc
ccttcaacctctgatactgttgtgatgagttcaggggcagaaagctcaaacctgaatgta
cttgggaacctccaaatcacaaatgttacctccgctagtgtaagcctggcatggtcggcg
cccgacgaggcgttcgacagctttatggtggagctcagttctccatcaggggtgacacaa
gctcatgtgaccaccttaccgggaaatgtgaggaaggctgaaataaagggtttgaccccc
tcgacacattatgatgttacattgcaagggcttttggatgggaatcgatctttgcctctc
aaagttttagccactacagaggacctgaagcccatggtggtgaacctcaccatctctgac
attacatgggacagcttcactgcgtcctggagccccacagttggggactttgacagcttt
gtcattgaggtaacaaacttggagaatttcgcagagagccagaacctctcactgtctgga
gacgctttcagcctggatatctccgggctgaatcccaacaccagctacctggttggcctg
tacgggatgtatcagggctccttccttgagcctgtgtacagtgaagccaccacagcgaat
cagccggtgcttggcaaactatatatctcaaacttaacgtcagagagcttttctatcctg
tggaacgccactgaaggagagtttgatggttttatcctggaaataattgattctgattgg
ctgatggagccaaaggaatataacatatcccacaatgataagtccatcaatgtcagaggg
ctcaggcccagcactgattacatagcctacctctatgggacgtacaagggatcccgaacc
agtgctgtcagtattgttgcatcaacagctgaagagcctgatttgtccaggctagttgtt
tctaacattacctcagacagattctttctgtcgtggcggacaagagagaagccttttgat
aactttgtagtagaagtcagagagtctgctttgccctctcaggcaatggggcgcgctctg
ccgggagacgtgcgctccacagtcatggccgggctcaaagccagcacaagctacaacata
aagctgtacgctagtactggtggccagaacacacagcctctatttgctgtagcttcaaca
gaggatctcccacagttggggcccatagctgcttcgtctgcaagtccacataatctcagc
ttgtcctggagcactgtgtcaggccattttgatggctttgttatccgggtcagtgactcc
gagcagcagtctgatccgctggagatcagacttcctggtgaaatccgtaacattacagtc
tcgaacttgatggatgccacaggctatgacattgaactgtatggtatttctcacgggcgc
cacactccctctgtgttaacccacgccgtcacagcttctttgcctaaagtggaaaacttg
accatttccaacataaccccctatggcttccgtgtgtcatgggaggtgaagcagcagctg
cagcaggaggattcacccccctctactgggggcttcagccactttcacatagtggtgaca
gactccggctggctgctggagcctcaggagttcactgtgccgggaaaccagagtcacctg
gacatctggggcctcatcaccggcataggatatgagctcaggctgacgggggtgtcagag
tcagggcttctctctcggcctctgaatacagtggctgtgacagaggctgagccggaggtg
gagcatctctttgtctccgacatcactgctgacagcttccgtctgtcgtgggcggcagat
gaagacatgtttgacagatttgtgattaaaataagagacagcaaaaggctgtcccatcct
aaggagtacagtgtcatcggtgaagagcgaaccaaggttttaaatggactcttgagtggc
actgagtatgaaatcgagctttatggtgtcactttggaccaacgctcccaacctattatt
ggggttgctcagacaggcctgagcacaccaatgggacttcatttctctgaagtgacggat
tcttctgccgtggttcactggtccatgtctccctctcctattgataactaccgcatcgcc
tatgtgccctttgaaggaggaagtccgatgacagtgactgtggacggcagtgtgtttgag
gctgtgctgcccaacatgatccctggcaaaacctaccaagtgactgtcagtgctgtgaaa
ggtctggaggaaagcgaccccagcaccgacactgtaaccacagctctggacagacctcag
ggcctgactgcagttaatatcacagacacaacggccttgctgctgtggcaaccgtctgtg
gccacagtcgatggttacgtcatcacctacagggcagattcagtgtccccggtggtggag
catgtttctggaaatacagtggattttgagatgggctccttagttcctggaacccaatac
acagttgtagttcatgccatgaaagaagctcagaagagtggatctgctgtcactgaattc
atcacagatgtggaccctcctcgtgatctgacagctataaacctccaaactgacagtgct
actctgacatggaaacccccgcaggctgctgtgaccggttacacactcagcttctcttct
gctgatggtgtgatcagggaagtggtgctgagcccgacagcttcctcttacagcatggct
cagctcagtggttccacagagtacagtgtcaaactgcaggccatcgctgggccccacagg
agtcgacatgtagccactgtcttcacgaccattggacagttgttcagacgaccccgggac
tgtgctcagatatacctgaatggagagacgacctctggtatatacaccatctatgtggga
ggagaggacggccagcccatccaggtttactgtgacatggccacagatggcggaggatgg
acggttgccctcagacgccagaatggaaagctggagttcttcaggaactggaagaactac
accgctggctttggtaacatgaatgatgagttctggctgggtctctccaacctttataaa
atcacatcctctggtcattatgagctgcgagtggacttgagggacaaaggggaatcagcc
tacgcccagtatgacaagttcacgcttgcagaaccaagaacacgttataaaatctacata
ggggcatacagtggaacagcaggtgattccatgacttaccaccagggtcgaccgttctct
acctatgacaacgacaacgatatcgctgtcaccaactgcgccttgtcctataaaggtgcc
ttttggtataaaaactgtcatcgcgtcaacctcatggggaaatacggtgacagcagtcac
agtaaggggatcaactggttccactggaaaggccatgaacactcgattgaatttgcggag
atgaagatcagaccagccaacttcagaaacttcgagagcagaaaaaaacgatcatag
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integrated database retrieval system
