Pleuronectes platessa (European plaice): 128425296
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Entry
128425296 CDS
T09923
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174 isoform X1
KO
K25178
coiled-coil domain-containing protein 174
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128425296 (ccdc174)
03041 Spliceosome [BR:
pplt03041
]
128425296 (ccdc174)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128425296 (ccdc174)
Spliceosome [BR:
pplt03041
]
Complex C
Other components
EJC/TREX
128425296 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
128425296
NCBI-ProteinID:
XP_053267825
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All DBs
Position
2:complement(15572411..15576310)
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AA seq
567 aa
AA seq
DB search
MDKNKKAFKVTASSLLDLKAELYRKQEQFKQEKLGQDNTGAGSKSKSNVKKPNVWSKPNP
GVSARAEKDAEQLDEEQKTLDTSRRRLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKII
DQKRETFAQWNREKDEEEDISTPIPAPENPDEEWVDFVDAWGRSRRCMKKDLPDFKNMDH
DLKGKGKSSSEKTLLSEDMRRELQRQEWEREEEEAMKRPIGPIHYEDIRAQEARELGVGY
FAFSQDREHRRKQRDTLDMLRDQTTEQRSKRERLKGKRQAILQARLAKVRQRKMRKNKLD
GTEDEDGDEEKEAEEDESKLMGAPPPPEDCPEVSTVKRVQVEIQERKDSKPGVPHVREWD
RGKEFMFSEWKDRRRDERESDFAPPSAYFSDGKKHAPWKNKTQETQSKMSFKWSKGPEEI
SESQEKPKPHPETAASPPQPQQNDPPTSPPRTTSQPPPSQPQVVSAPVSAPLFNPQYPPP
PPFYPQYPPTHPAQFAGPPHYPSQYPPQYPPQFPPQFPPQYVQQYPPQPQSQAQQPPVPS
QHSQAEPPPPGSSQSLDDMLSFYRNTM
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaacaagaaagcattcaaagtgacggcttcttcgttactggaccttaaagct
gagctgtacaggaagcaggaacaattcaaacaggagaaactcgggcaagacaatactgga
gctggatcgaaatctaaatccaacgtgaagaaaccgaatgtctggagcaaacctaacccg
ggtgtttctgctcgggctgagaaagatgcagagcagctggacgaggagcagaaaactctt
gatacatcaaggcgcaggttggaggagaaggccaaactgtacgagcaaatgacaaaagga
gactttccagatgaagagaccgagggtctgttcctggttgatttcacgcagaagattatt
gaccaaaagagagaaacatttgcacagtggaacagggagaaagatgaagaggaagacatc
tcaacacctatacctgctcctgaaaacccagatgaggaatgggtggactttgttgatgct
tggggccgatctcgaagatgcatgaagaaagacctgcccgattttaagaatatggaccat
gaccttaaaggaaaagggaaatcctcatctgagaagactttactctcagaggacatgcgt
cgagagctgcagaggcaagagtgggagagggaggaagaggaggctatgaagaggcctatt
ggaccaatccactacgaggatatccgagcacaagaggctcgagagcttggtgttggatac
tttgcgttttctcaggatagagagcatcgcaggaagcagagagatactctggacatgctc
agagaccagacaacagagcagcgtagtaaaagagaacgactgaaggggaagaggcaggcc
atcctgcaggccagattggccaaggtaagacagaggaagatgaggaagaacaagcttgat
ggcactgaagacgaagacggagacgaggagaaagaggcagaggaagacgaaagtaaattg
atgggagccccgccgccaccagaggactgtcctgaggtcagtactgtgaagagggtgcaa
gttgagatccaggaaaggaaggactctaaaccaggagttcctcatgtcagagagtgggac
agaggcaaagagtttatgtttagcgaatggaaagaccggcgccgggatgagcgagagtca
gactttgctcctccctctgcatatttctctgatgggaaaaagcatgcaccatggaagaat
aaaactcaggagactcaatccaaaatgtccttcaagtggtcaaagggccctgaagaaata
tctgagagtcaagaaaaaccaaaacctcatcctgaaactgcagcttcaccaccacaacct
caacaaaatgatccccctacttcaccgccacggaccacgtcacagccaccaccctcacag
ccccaagttgtttcagcccctgtgtctgctcctctttttaatccccagtatcctcctcct
cctccattttatcctcaatatcctcctactcatcctgcccagtttgcaggtccacctcac
tacccctcccagtatcctccccagtatcctccccagtttcctccccaatttccaccccag
tatgtccaacagtatccgcctcagcctcagagccaggctcagcaaccccccgtgccctcg
cagcacagccaggctgagccgccccctccaggttcttctcagagtctggatgacatgttg
tccttctacaggaatactatgtga
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