Pleuronectes platessa (European plaice): 128425553
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Entry
128425553 CDS
T09923
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128425553 (trdmt1)
04121 Ubiquitin system [BR:
pplt04121
]
128425553 (trdmt1)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128425553 (trdmt1)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128425553 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
Motif
Other DBs
NCBI-GeneID:
128425553
NCBI-ProteinID:
XP_053268172
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Position
20:1035671..1070820
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AA seq
545 aa
AA seq
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MSGFLIGRTSCTPQQASVLTDSVLNMLVTDMRPLSMVEDDGFRTMIHTFYPGYTLPSRTH
FTRLMERKYEQTFNAVKTALNNGNNSKLALTTDVWTSVAIEAYLGVTCHYITDDWEMKSI
CLTTMPLQDRHTGSNIAEWLEEVVARFEIPPSNIIAVVHDNGANVVAAARILEEKNGWSS
VRCTGHTLQLVINAALKHPSIEKAVGAARCLVEHFKKSELASGKLRAKQQQMATPEHSLV
QDVSTRWNSTFYMVSRLIEQRWPVTATLSDISVTQKGKRYLDLKPEQWILLEELLKALKP
FECATVFMTAEKYTTISAIPPLVKGLLKSTESAAYESGPLQAFQVTATNQLQERWKRETT
FSDTAAANTVILASAFDPRFRKLKFLSPEEIVCVQNKVQRLALGEMERNLQQPDTSSDTA
SASTTPTTLLDSLLGSSSEEGDGSSGDDDVNTKVREEVLRYFGEKKLSKEENPLQWWKNN
MDKYPIMARLAKSYLCIPGTSTPSERLFSAAGNIASKKRASLSQEHVDMLTFLHCNAKFM
PKTVN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcttcctgattggaagaacatcatgtacaccacagcaagcatctgtcttgaca
gatagcgtccttaacatgctagtcactgacatgaggcctctgtcaatggttgaagatgac
ggcttcaggacgatgattcacaccttctatcctggttacactcttccctcaaggacccat
ttcactaggcttatggagagaaaatatgagcagacattcaatgcagtgaagactgctttg
aacaacggcaacaacagcaaacttgctctcaccactgatgtttggacaagtgtagccatt
gaggcctacctcggtgttacttgtcactacatcacagacgattgggaaatgaagtcaatc
tgcctcactaccatgccactgcaggacagacatactggatccaacatcgccgaatggttg
gaagaagttgtagccaggtttgaaatccctcctagcaacatcattgccgtagtccatgat
aatggtgccaatgttgtggctgcggcacgcatcctggaggagaagaatgggtggtcctct
gtgcgttgcactggtcataccttgcaacttgtgatcaatgctgcgttaaagcatccgagc
attgaaaaggctgttggggctgcaagatgtctcgtggaacattttaaaaaaagtgagcta
gccagcggtaagctacgagcaaaacaacaacagatggccacacctgagcacagccttgtt
caagatgtaagcacaagatggaacagcaccttttatatggtcagtcgactgattgagcaa
agatggcctgtaacagcaacactgtctgacatctctgtcacacagaaaggaaaaaggtac
cttgatttgaaaccagaacagtggatcctgctagaagaacttttaaaagccctaaagcct
tttgaatgtgccactgtgttcatgactgcagagaaatacactacaatatctgcaatacct
ccacttgtgaaggggctattgaagtccaccgagagtgctgcctacgagtcgggcccgttg
caggcttttcaagtcactgctaccaatcagctccaggagcgatggaaaagggagactacc
ttttcagacacagcagcagcaaacacagtgattcttgcgtcagcatttgacccaaggttt
aggaaactgaagtttctttcccctgaagaaatcgtttgtgttcaaaacaaagtgcaaaga
ctggcgcttggagagatggagaggaatttgcagcagcccgacacttcctccgatacagct
tctgcatcaacaactcctaccacactacttgattcactccttggttccagcagtgaagaa
ggggatggatcaagcggagatgatgatgtcaacacaaaagtacgggaagaagtcctcaga
tacttcggagaaaagaaactttcaaaggaagaaaacccattgcagtggtggaaaaacaac
atggacaaatatccgataatggccaggctagccaagtcctacttgtgtatccctggcacc
tcaacaccatcagagcggctgttctctgccgcaggcaacatagcttcaaagaagagagcc
agccttagccaggagcatgtagacatgcttacatttttgcattgcaatgcaaagttcatg
cctaaaacggttaactga
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