Pleuronectes platessa (European plaice): 128425558
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Entry
128425558 CDS
T09923
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128425558 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128425558 (arfgef1)
Membrane trafficking [BR:
pplt04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
128425558 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
128425558
NCBI-ProteinID:
XP_053268185
LinkDB
All DBs
Position
20:complement(8617696..8665096)
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AA seq
1941 aa
AA seq
DB search
MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDNT
TPGKKLIDRIIETICACFQGPQTDEGIQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQHSPVTQHTEPDSPQLQSHTHPPGKGSSQEANGPVSPPTPSINIPSTPSTPSTPAA
EGSSRSVSGEQEEQGPVYESPDPENGSDFCVAENEQTEADQATAAAQNGAAQQHPEAGEE
EEESPNYEEKAQEIVQSILQEVINTVAGGHCLDPANLCSDTKESGGEGEPAESEPTEAVT
EGTQSSLDDEGTLGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSNDTQESGAAPGQP
PGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPI
FKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEVFFKEI
FLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIA
QGRGGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKPAEQES
TETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFN
KKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYVDQM
DFLGKDFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYS
IIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEENLSAIYDEIAGKKIAMKETKEI
TMKSNKHSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLA
WTPFLAAFSVGLQDCDDTEVASLCLEGIRWAIRIASIFSIQLERDAYVQALARFTLLTAS
SGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVKARYISGT
VRGKEGFLTSTKEQSNDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDRVFTGSTR
LDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDH
FNKVGCNSNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPTIRD
MVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDEGIVELAFQTTGHIVTNVFEKHFA
ATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDMNVAPE
DRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIVFRI
FDNMKLPEQQTEKAEWMTTTCNHALYALCDVFTQYFESLNDVLLDDILAQLYWCVQQDNE
QLARSGTNCLENVVILNGEKFSPETWDKTCNCMLDIFKTTIPHALLTWRPEGEHLTTQSL
SDKQLDSVSQKSVDIQSRSDDQHSISSADRVATENRRQSQFSAASGMCEDGSRSRTPTKV
QDQLLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAKYFAAAQRDAICAPDVPVDTQD
QGMYQYLTSEQLFKLLDCLLESHDFAKAFNSNNEQRTSLWKAGFKGKSKPNLLKQETSSM
ACGLRILFRMYTDESRQDAWAEVQRRLLSVCSEALAYFLALTSESHREAWTNLLLLFLTK
VLKISDERFKAHASRYYPLLCEIMQFDLIPELRTVLRKFYLRIGLVFNIAQLPEPEPEPQ
PSHVEQEADLEEAEEAGEEAQ
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagggcaaaaagacgaaaaacatgttcctcacacgcgctctggagaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggca
ctggaggaaatcaaagaagagtcagagaaattaagtccacccagcggagacggcaaatct
ggttccagcactttaccgccaatcaaatcaaagaccaacttcattgaagccgacaagtac
ttcttgccgtttgagctggcatgtcagtccaaatgtccccgcatcgtcatcacctcgctc
gactgtttacagaagctgatagcgtacggccacttgacgggcagtgccccggacaacacg
acccccggcaagaagctcatcgacaggatcatcgagaccatctgcgcttgtttccaaggg
ccgcagacagatgagggtattcagctacagattattaaggccctgctgacagcagtaacc
tctcagcacatagaaatccacgagggcactgtcctgcaggcagtccgcacatgctacaac
atctacctggccagcaagaacctcatcaaccagaccacagcaaaggccacgctcacacag
atgctcaacgtcatctttgcacggatggagaatcaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagcgaagcagctggagaga
gagcgacaccggcagcactccccggtcacccagcacaccgagccagactcccctcagctg
cagtctcacacccacccaccgggcaagggttcgagccaggaggccaacggacccgtcagc
cctccgactcccagcatcaacatcccatccaccccgtccaccccttcaacaccggccgca
gagggcagcagcaggtcggtgtctggggagcaggaggagcaggggcctgtgtatgagagc
ccagatccagagaacggctctgatttctgtgtggccgaaaatgaacagactgaggccgac
caagctaccgcagcagcacagaatggagcagcccagcagcatccagaggcaggcgaggag
gaggaggagtcgccaaactatgaagagaaagcccaggaaatagtgcagagtattctgcag
gaggtcatcaatactgttgcaggagggcactgtctggacccggcgaacctctgctctgac
acaaaggaatctggcggcgagggcgaaccggcggagtcggagccgactgaagcagtgaca
gagggcacccagagctccctggatgacgagggcaccctgggtagcgacagtgagcacgtc
cacgccaacggcatccccggcacgcccatctcagccagtttcaccccctcgctgcctgat
gacagactgtctgtctcatccaatgacactcaggaatcaggagctgcaccgggacagcca
cctggcgctaaattctcccacatcctccagaaagatgccttcctcgtctttcgctctctc
tgcaagttgtcgatgaagccgctgtcagatggtccacctgatcccaagtcccacgagctg
cgatcgaaggtcctgtccctccagctgcttctgtccatcctgcagaacgccgggcccatc
ttcaagaccaacgagatgttcatcaacgccatcaagcagtacctctgcgtggccctctcc
aagaacggcgtctcctccgtgcctgaggtcttcgagctctcgctctccattttcctcacg
ctgctctctcacttcaagacacacctcaagatgcaaatcgaggttttcttcaaggagatt
ttcctgtacattcttgagacgtccacaagctcctatgaccacaagtggatggtcatacaa
accctcactagaatatgtgcagatgcccagagtgtggtggacatctatgtgaactacgac
tgtgacttgaatgctgctaacatattcgagcgtctggtcaacgacctctcgaaaattgca
cagggtcgcgggggccacgagcttggcacaacaccactgcaggagctgaccctgagaaag
aaaggtcttgaatgtctcgtgtccatcctgaaatgtatggtggagtggagtaaagaccaa
tacgtcaaccccaactctcagacgagcctcggccaagagaaaccagcagagcaggagagc
acagagaccaaagctcctgagaccataaaccgctatggaagtatcaactctctggactcc
acagcctcatctggcattggcagctacagcacccaaatgtcaggcactgacaaccccgag
cagtttgaggtcctcaaacagcaaaaggagatcatcgagcagggcattgatctgttcaac
aagaaaccaaagagaggaatccagtaccttcaagagcaaggcatgctgggtacaacccca
gaggacctggctcagttcttgcaccaggaagagaggcttgactcgacgcaagtgggagag
ttcctaggggataatgaccgtttcaataaagaggtgatgtacgcctacgtggatcaaatg
gacttcctgggtaaagactttgtttccgctctgaggacgttcttggaaggattccggctc
cccggtgaggcccagaagatcgaccggctcatggagaagttcgcagcaagatatctggag
tgcaaccagggacaaaccctctttgccagtgctgacacggcatatgtcctcgcctactcg
atcattatgttgacgacagaccttcacagcccacaggtgaagaataaaatgacaaaggag
caatacatcaagatgaaccgcggcatcaacgacagcaaagacctgcccgaggaaaatctc
tcggccatctatgacgagatcgccgggaaaaagatcgccatgaaggagacgaaagagatc
acgatgaaatccaacaagcacagtgtggcaagtgagaagcagaggcgtctgctgtacaac
gtggagatggagcagatggccaagacggcgaaggcactgatggaagccgtcagccatgtc
caggctcccttcaccagtgccacacatctggagcacgtcaggcccatgtttaagctggcg
tggacacccttcctggctgctttcagcgtgggtctacaggactgtgacgacaccgaggtg
gcctctctgtgtcttgaaggcatccgctgggccatcaggatagcgagcatcttctccata
cagttggagagggacgcgtacgtccaggcgctggccaggttcaccctgctcactgccagc
tccggcatatcagagatgaagcagaagaacatcgacaccatcaagaccctcatcactgtg
gcccacactgatggcaactatctgggcaactcctggcacgagatcatgaagtgcatcagt
cagttggagctggctcagctgatcggcacaggggtgaaggcacgctacatctcagggaca
gtgcggggcaaagagggctttcttacaagcaccaaggagcagagcaacgatgagtacctg
ggtctagtcggagggacagtggaccgtaagcagattgccagcattcaggaatccattggc
gagaccagctctcagagtgtggtggtcgcagtcgacagggtattcacaggttctaccaga
ctggacggcaacgcaatagttgattttgtgcgctggctgtgtgctgtgtccatggatgag
ctggcctcgcccacacacccacgtatgttcagcctgcagaaaatagtggagatctcctac
tacaacatgggccgcatccggctgcagtggtccaggatctgggaggtcatcggggaccac
ttcaacaaggtcggctgtaactccaacgaagacgtggcgatcttcgccgttgactctctc
aggcaactgtccatgaagtttttggagaagggggaactggctaatttcagattccagaaa
gacttcctgaggcctttcgagcacatcatgaaaaagaacaggtctcccaccatcagagac
atggtggtgcgctgcatagcccagatggtgaactcccaggcggcaaacatccgctcgggc
tggaagaacatcttctccgtctttcacctggccgcttcggaccaggacgagggcattgtg
gagctggctttccagaccacgggtcacatcgtcacgaatgtatttgagaagcactttgcg
gccaccatcgactccttccaggacgccgttaagtgtctgtcggagtttgcctgtaacgcc
tcgttccccgacaccagcatggaagccatccgcctcattcgacactgcgccaaatacgtc
tcagagaggccgcaggcctttaaagactacaccagtgatgacatgaatgtagcgcctgag
gaccgtgtgtgggtgcggggatggttcccaattctcttcgagctctcttgcatcatcaac
aggtgtaagctggatgtcaggaccaggggcctaaccgtgatgtttgaagtgatgaagacc
tacgggcacacctttgaaaagcactggtggcaggacctgttcagaatcgtcttcaggatc
ttcgacaacatgaagctgcccgagcaacagacggagaaagccgagtggatgaccaccacc
tgcaaccatgcactttacgccctctgtgatgtcttcacccaatattttgagtccctcaat
gatgtcctgctggacgatattctggctcagctctactggtgtgtgcagcaagataatgag
cagcttgcccgttcaggcaccaactgtctggagaatgtggtcatcctgaacggagagaag
ttttcccccgagacctgggacaagacatgtaactgcatgctggacatcttcaagaccacc
atccctcacgcgctgttaacatggagacctgagggagaacacttgacaacccagagtctg
tctgacaaacagttggactctgtttcccagaagtcagtggacatccagtcccgctctgat
gaccagcattccataagcagcgccgatagggttgccacggagaaccggcggcagagtcag
ttcagcgcagcatcaggcatgtgtgaggacggctccaggagcaggaccccaacaaaggtc
caggatcagctgctgttctctgctttgctgataaagtgtgtcgtgcagctggagctcatc
cagaccattgataacatcgtgttttttcctgccaccagtaagaaggaagatgctaagtac
tttgctgctgctcagcgggacgctatctgtgccccagacgtccctgtggacacccaggac
cagggcatgtatcagtacctgacgtctgagcagctcttcaagctgctcgactgtctgctg
gagtcccacgacttcgccaaagctttcaactccaacaacgagcagaggacttcactgtgg
aaagcaggtttcaaaggaaagtcgaagcccaacctgttgaagcaggagaccagcagcatg
gcttgtggcctccgcatcctgtttcgtatgtacacagacgagagccgccaagacgcctgg
gccgaggtccagagacgactcctcagtgtgtgcagcgaggctctagcgtacttcctggcc
ctgacctcagagagccacagagaggcctggaccaacctgctgctgctcttcctcaccaag
gtgctgaagatcagcgacgaaaggttcaaggctcatgcgtccaggtactaccctctgctc
tgtgagatcatgcagttcgacctgatcccagagctgcgcacggttcttagaaagttctac
ttgcggatcggcctcgtgttcaacatcgcacagctgcccgagcccgaaccggagcctcag
ccgtcgcacgttgagcaggaagcggacctggaggaggccgaggaggccggggaggaggcc
cagtga
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integrated database retrieval system
