Pleuronectes platessa (European plaice): 128425698
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Entry
128425698 CDS
T09923
Symbol
shrprbck1r
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04217
Necroptosis
pplt04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128425698 (shrprbck1r)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128425698 (shrprbck1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128425698 (shrprbck1r)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128425698 (shrprbck1r)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128425698 (shrprbck1r)
Multi subunit type E3
LUBAC complex
128425698 (shrprbck1r)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
zf-RING_5
zf-RING_11
IBR_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
128425698
NCBI-ProteinID:
XP_053268405
LinkDB
All DBs
Position
20:10471195..10482604
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AA seq
726 aa
AA seq
DB search
MSLSSGGWTHTPGFSAPDQSAALPAQHGASPPQPGCHTVLISVRVSVCHSGIRPLCLPGA
GDESLRLQLSMDPGKSGEFRLSLQDSSETGRSVTVAEFDLRTVNYEVKSPKCHELHLTAP
PHDRISFNFRCEQEANEWATVVLSSLREAHRAVAPQDNGPQRPLEDLQRHDTLALQRTGL
SVFPVHVCIYPSVEETCIDLTRAIEAGDMQSASLIAVTLARKHIALKIQPFAQDYEDSEI
NLAVVAEDSSSSCCVTVKVFPHMTTAALKQQMFLEYGFHPRVQRWVIGQCLCSDQRSLAS
YGVRQDGDTAFLYLLSARYVHLTHQVLQQDQESALLLTPPSLSLPTPPLPHTSTNGTSSQ
DRRPYTTLPPRLHTSSNTERGNISEIKDLINLEMPQLNEALSPSTSTSSTKGWSCPSCTY
INKPTRPGCEICSTNRPENYVIPGGYRPDPLELRRIQQEKEAIRQYQQAREQERRENFAR
LMMIDDQDLVPNPESVDCRICYVDLQPGQGVLLRECLHCFCRDCLRSVIMLSEEPEVSCP
YRDETYSCACSLQEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATADCRGWCVYED
TVNVFHCPVCGKHNCLICKAIHEGMNCKQYQDDLAARAINDSAARRTTHLLKTLVQSGEA
MHCPQCGIIVQKRDGCDWLRCTVCHTEICWVTRGPRWGPQGPGDTSGGCRCNVNNQKCHP
KCQNCH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgagttcgggcgggtggactcacacccccggcttctcagcgccggaccagtcc
gccgccctccccgctcagcatggggcctcgccgccacagcccggctgccacaccgtcctc
atctcggtgcgggtgtcggtgtgccactccggcattcggccgctgtgtctccccggagca
ggcgacgagtcactccgcctgcagctcagcatggacccggggaagtccggggaattccgc
ctgtcgctgcaagacagcagcgagactggccggagtgtgaccgttgctgagtttgatttg
agaaccgtaaactacgaagtgaagtcaccaaagtgccacgagctgcatttgactgcgccg
ccacatgaccgcatcagcttcaacttccgctgtgagcaggaggccaatgagtgggctact
gttgttctgtcatcactgagagaagcacatagagcagttgctcctcaagataatggccca
cagcgccccctggaggatctccaacgtcacgacacattggccttgcaacgcacaggcttg
tctgtgtttcccgtgcatgtatgcatttatccatctgtagaggaaacctgcatagacctg
acccgggccatagaagcaggtgacatgcagtctgcctctctcatcgctgtcacactcgca
cggaagcacattgccctcaagatccagccctttgcccaagactatgaagactctgaaatc
aatttggctgttgtagctgaagattcttcctcgtcctgttgtgtcactgtgaaagttttc
cctcatatgacaactgcagcactgaaacagcagatgtttcttgagtacggcttccacccg
cgggtgcagcgctgggtgatcggccagtgcttgtgcagcgaccagcgctctctcgcctcg
tacggcgttcgtcaggacggcgacacggctttcctgtacctcctgtcagcccgatacgtc
cacttgacacaccaagtcctgcagcaggatcaggagagcgcccttctcctcacccctcca
tcactgtcgctgcccaccccgcccctccctcatacctctactaacggcacctcatctcag
gaccggaggccgtacactaccctgcccccaagactccatacgagcagcaacactgaaaga
ggaaacatcagtgaaatcaaagatctcatcaacctagagatgcctcaactgaacgaagca
ctgagcccctccacatccacatcttccaccaagggctggtcatgcccctcttgcacttac
attaacaaaccgactcggccgggctgtgagatctgcagtaccaaccggccggagaactac
gtcatcccggggggttatcgaccggaccccctggaactccggcgcatccagcaggagaag
gaggcgatcagacagtaccagcaggcgagggaacaggagcgccgggagaatttcgctcgg
ctgatgatgattgacgaccaagatctggtgccgaacccggagtctgtggactgtcggatc
tgctacgtggacctgcagcctggacagggcgtcctgctgagggagtgtcttcactgcttc
tgcagagactgtttacgctcggtcatcatgttgagtgaggagccagaggtgtcctgcccc
tacagagatgagacgtattcctgcgcctgctccctgcaggagagggagatcagagctttg
gtgccagcggaggagtacgagcgctggctgcagagaggcctgtcagtggcagagtctcga
tgtgagggcagctaccactgtgccaccgccgactgtcggggctggtgcgtgtacgaggac
acggtcaatgtcttccactgccctgtctgcgggaaacacaactgtctgatttgtaaagca
atccacgagggaatgaactgcaaacaataccaggatgatctcgcagcccgggctataaat
gactctgctgcaaggaggacgactcatctactcaagactctggtgcagtcaggggaggcg
atgcactgtccccagtgtggcatcatagtgcagaagagggatggatgtgattggctacgc
tgcactgtctgtcacactgagatatgctgggtaaccagaggaccccgctggggaccgcag
ggtcctggagacaccagtggaggatgtcgctgcaatgtcaacaatcagaaatgtcatccg
aaatgtcaaaactgccactga
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