Pleuronectes platessa (European plaice): 128425750
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Entry
128425750 CDS
T09923
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128425750 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pplt01002
]
128425750 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pplt00536
]
128425750 (shha)
Peptidases and inhibitors [BR:
pplt01002
]
Cysteine peptidases
Family C46: hedgehog family
128425750 (shha)
Glycosaminoglycan binding proteins [BR:
pplt00536
]
Heparan sulfate / Heparin
Morphogens
128425750 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Intein_splicing
Hint_2
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
128425750
NCBI-ProteinID:
XP_053268496
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All DBs
Position
20:15516649..15525384
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AA seq
414 aa
AA seq
DB search
MLLWTRIALAAVIGLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTTKPVKALQTGDRVLAADAHGQPVYTDFIM
FIDQDSTTRRLFYVIETDSGQKIALTAAHLLFVGPSNSTERAHRRMSAVFASQVRPGHTV
FVLDAERLQPVTVTRIYTQEHEGSFAPVTAQGTVVVDQVLASCYAVIQDHELAHWALAPV
RLAHWVSSLLFSSQPQASAQTDGVHWYSKVLYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgcattggccgctgtcatcggcttgtccttggtgtcctcg
gggatgggatgcggaccgggcaggggctacggccggagaaggcacccgaagaagctgaca
cctctcgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacgagaaactccgagcgatttaaagagctgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggcgccgacaggctcatgactcag
agatgtaaagacaagctgaactcgctggccatctcagtgatgaaccagtggcccggggtg
aagctgcgggtcaccgagggctgggacgaggacggccaccacttcgaggagtctctccac
tacgagggccgggccgtggacatcaccacctcggacagggacaagagcaagtacggcact
ctgtccaggctggcggtggaagccggatttgactgggtctattatgagtccaaagcccac
atccactgctctgtgaaagcagagaactcagtggcagcaaagtcaggtggctgcttcccg
ggctcctccaccgtcaccctgcaggacggaaccacgaagccggttaaagccctgcagacc
ggcgacagggtgctggcggcggacgcgcacggacaaccggtctacaccgacttcatcatg
ttcatagaccaagactcgacgacccggaggctcttctacgtcatcgagactgactcgggc
cagaaaatcgccctcaccgccgcgcacctcctcttcgtcggccccagcaactccacggag
cgcgcgcacaggcggatgtcggcggtgttcgccagccaagtgcgacccggacacacggta
ttcgtgctcgacgcagagcgactccagccggtgaccgtaacacggatttacacgcaggag
cacgagggctcgtttgcgccggtgaccgcgcagggcaccgtggtggtggaccaggtgctc
gcgtcctgttacgcagtgatccaagaccacgagctggcgcactgggccctggcaccggtc
cggctcgcccactgggtgtcctcgttgcttttcagctcccagcctcaggccagtgcgcag
acggacggggtgcactggtactccaaggtcctttatcaattaggaacatggctcttggac
agccactcgatccatccacttgggatgtcagtatacccgagttga
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